Detailed information
Bioinformatically predicted
Overview
| Name | fimT | Type | Machinery gene |
| Locus tag | EL064_RS12955 | Genome accession | NZ_LR134178 |
| Coordinates | 2993126..2993659 (+) | Length | 177 a.a. |
| NCBI ID | WP_101901255.1 | Uniprot ID | A0A2H5FQ98 |
| Organism | Legionella sainthelensi strain NCTC12450 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2988126..2998659
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL064_RS18580 (NCTC12450_02726) | - | 2988652..2988963 (-) | 312 | WP_241969457.1 | hypothetical protein | - |
| EL064_RS12935 (NCTC12450_02727) | - | 2989001..2990128 (-) | 1128 | WP_241969458.1 | glycosyltransferase family 39 protein | - |
| EL064_RS12945 (NCTC12450_02728) | - | 2990493..2991863 (+) | 1371 | WP_128130159.1 | hypothetical protein | - |
| EL064_RS12950 (NCTC12450_02729) | - | 2992172..2993026 (+) | 855 | WP_241969828.1 | polysaccharide deacetylase family protein | - |
| EL064_RS12955 (NCTC12450_02730) | fimT | 2993126..2993659 (+) | 534 | WP_101901255.1 | GspH/FimT family protein | Machinery gene |
| EL064_RS12960 (NCTC12450_02731) | pilV | 2993672..2994217 (+) | 546 | WP_115702006.1 | type IV pilus modification protein PilV | - |
| EL064_RS12965 (NCTC12450_02732) | - | 2994214..2995281 (+) | 1068 | WP_115702004.1 | PilW family protein | - |
| EL064_RS12970 (NCTC12450_02733) | - | 2995401..2995847 (+) | 447 | WP_164838713.1 | pilus assembly protein | - |
Sequence
Protein
Download Length: 177 a.a. Molecular weight: 18702.60 Da Isoelectric Point: 6.8740
>NTDB_id=1118817 EL064_RS12955 WP_101901255.1 2993126..2993659(+) (fimT) [Legionella sainthelensi strain NCTC12450]
MKFIITTKQGFTLIELLITLLVLCILLVIAVPALSTLLMNNRLIAKTDIFVNSLNYARNTALGESINVVVCPFGVAQSTT
CGGNWSNGWIVVTQPSVGTSSLLQSQQLFSADPVLSSNVASVIFDPHGLTTTSGNFKFCDSRGGAFARSVEVLATGFVQS
SATPGQAVWDNSALTCP
MKFIITTKQGFTLIELLITLLVLCILLVIAVPALSTLLMNNRLIAKTDIFVNSLNYARNTALGESINVVVCPFGVAQSTT
CGGNWSNGWIVVTQPSVGTSSLLQSQQLFSADPVLSSNVASVIFDPHGLTTTSGNFKFCDSRGGAFARSVEVLATGFVQS
SATPGQAVWDNSALTCP
Nucleotide
Download Length: 534 bp
>NTDB_id=1118817 EL064_RS12955 WP_101901255.1 2993126..2993659(+) (fimT) [Legionella sainthelensi strain NCTC12450]
TTGAAGTTCATAATAACAACCAAGCAAGGGTTCACATTAATTGAGCTCTTAATCACATTATTAGTTCTTTGTATTTTATT
AGTTATAGCAGTGCCAGCATTGAGCACTCTGCTAATGAATAATCGTTTAATTGCTAAAACAGATATATTCGTAAATTCAC
TTAATTATGCCCGCAATACCGCTTTAGGTGAGTCAATCAACGTTGTAGTATGTCCTTTTGGTGTAGCTCAATCGACAACA
TGTGGTGGAAATTGGAGCAATGGATGGATTGTGGTCACTCAACCTTCTGTAGGTACGAGTTCATTATTACAAAGCCAACA
ACTTTTTTCTGCAGACCCGGTGCTTTCAAGTAATGTAGCCAGCGTGATTTTTGATCCACATGGATTGACAACAACATCAG
GTAATTTTAAGTTCTGCGACAGCAGAGGTGGAGCATTCGCTCGCTCAGTAGAAGTATTGGCAACTGGATTCGTTCAATCA
AGCGCAACCCCTGGCCAGGCGGTGTGGGACAACAGCGCACTTACATGTCCTTAA
TTGAAGTTCATAATAACAACCAAGCAAGGGTTCACATTAATTGAGCTCTTAATCACATTATTAGTTCTTTGTATTTTATT
AGTTATAGCAGTGCCAGCATTGAGCACTCTGCTAATGAATAATCGTTTAATTGCTAAAACAGATATATTCGTAAATTCAC
TTAATTATGCCCGCAATACCGCTTTAGGTGAGTCAATCAACGTTGTAGTATGTCCTTTTGGTGTAGCTCAATCGACAACA
TGTGGTGGAAATTGGAGCAATGGATGGATTGTGGTCACTCAACCTTCTGTAGGTACGAGTTCATTATTACAAAGCCAACA
ACTTTTTTCTGCAGACCCGGTGCTTTCAAGTAATGTAGCCAGCGTGATTTTTGATCCACATGGATTGACAACAACATCAG
GTAATTTTAAGTTCTGCGACAGCAGAGGTGGAGCATTCGCTCGCTCAGTAGAAGTATTGGCAACTGGATTCGTTCAATCA
AGCGCAACCCCTGGCCAGGCGGTGTGGGACAACAGCGCACTTACATGTCCTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimT | Legionella pneumophila strain Lp02 |
61.31 |
94.915 |
0.582 |