Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | EL064_RS01635 | Genome accession | NZ_LR134178 |
| Coordinates | 373969..375021 (+) | Length | 350 a.a. |
| NCBI ID | WP_115703490.1 | Uniprot ID | - |
| Organism | Legionella sainthelensi strain NCTC12450 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 368969..380021
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL064_RS01610 (NCTC12450_00351) | - | 369162..370088 (-) | 927 | WP_115703498.1 | type IV secretion system DotC family protein | - |
| EL064_RS01615 (NCTC12450_00352) | dotD | 370069..370560 (-) | 492 | WP_027270903.1 | type IVB secretion system lipoprotein DotD | - |
| EL064_RS19190 | rsmD | 370740..371286 (-) | 547 | Protein_325 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| EL064_RS01625 (NCTC12450_00355) | - | 371283..372587 (-) | 1305 | WP_128129474.1 | pitrilysin family protein | - |
| EL064_RS01630 (NCTC12450_00357) | - | 372584..373907 (-) | 1324 | Protein_327 | pitrilysin family protein | - |
| EL064_RS01635 (NCTC12450_00358) | pilA | 373969..375021 (+) | 1053 | WP_115703490.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| EL064_RS01640 (NCTC12450_00359) | ftsE | 375008..375658 (+) | 651 | WP_115703488.1 | cell division ATP-binding protein FtsE | - |
| EL064_RS01645 (NCTC12450_00360) | ftsX | 375652..376582 (+) | 931 | Protein_330 | permease-like cell division protein FtsX | - |
| EL064_RS01650 (NCTC12450_00362) | rpoH | 376629..377483 (+) | 855 | WP_115703486.1 | RNA polymerase sigma factor RpoH | - |
| EL064_RS01655 (NCTC12450_00363) | - | 377644..378522 (-) | 879 | WP_101899370.1 | alpha/beta fold hydrolase | - |
| EL064_RS01660 (NCTC12450_00364) | - | 378776..379492 (+) | 717 | WP_128129475.1 | dienelactone hydrolase family protein | - |
Sequence
Protein
Download Length: 350 a.a. Molecular weight: 38334.11 Da Isoelectric Point: 6.2453
>NTDB_id=1118792 EL064_RS01635 WP_115703490.1 373969..375021(+) (pilA) [Legionella sainthelensi strain NCTC12450]
MIKWFKRSHTPTSSEADESQHKEELLPQAPVKEVEQEQEPVKEGFFARFRKSLSKTRHQLGDGIGRLLLGKKEISQDLLD
ELETLLISADLGIETTQMVLKQLAEGLARKQLSDGDAVYDALKSHLQAILNQKKQLLTLETEDHSPFVILMVGVNGAGKT
TTIGKLAKQFQQQGKKVMLAAGDTFRAAAVEQLLVWGERNDIPVIAQHTGADSASVIFDALQAAKARKIDVLIADTAGRL
HTQSNLMEELKKVKRVLQKLCPEAPHETMLILDATIGQNALVQAKQFNEAVGLTGITMTKLDGTAKGGILFAIANELGIP
FRYIGIGEGIEDLQPFDAAQFVGALFNDHI
MIKWFKRSHTPTSSEADESQHKEELLPQAPVKEVEQEQEPVKEGFFARFRKSLSKTRHQLGDGIGRLLLGKKEISQDLLD
ELETLLISADLGIETTQMVLKQLAEGLARKQLSDGDAVYDALKSHLQAILNQKKQLLTLETEDHSPFVILMVGVNGAGKT
TTIGKLAKQFQQQGKKVMLAAGDTFRAAAVEQLLVWGERNDIPVIAQHTGADSASVIFDALQAAKARKIDVLIADTAGRL
HTQSNLMEELKKVKRVLQKLCPEAPHETMLILDATIGQNALVQAKQFNEAVGLTGITMTKLDGTAKGGILFAIANELGIP
FRYIGIGEGIEDLQPFDAAQFVGALFNDHI
Nucleotide
Download Length: 1053 bp
>NTDB_id=1118792 EL064_RS01635 WP_115703490.1 373969..375021(+) (pilA) [Legionella sainthelensi strain NCTC12450]
ATGATTAAATGGTTCAAACGCAGTCACACTCCTACCTCTTCAGAAGCTGATGAGTCCCAGCACAAAGAAGAGCTATTACC
GCAAGCCCCTGTGAAGGAGGTGGAGCAAGAGCAAGAGCCTGTAAAAGAAGGATTTTTTGCTCGGTTTAGGAAAAGTTTAA
GTAAAACGCGTCATCAGTTAGGTGATGGTATTGGCCGGTTATTGTTAGGAAAAAAAGAAATCAGCCAAGATTTGCTGGAT
GAGCTAGAAACTCTTTTAATCAGTGCTGATTTGGGTATAGAAACCACACAAATGGTATTAAAGCAATTGGCAGAAGGCTT
GGCACGCAAGCAATTATCTGACGGTGATGCGGTTTATGACGCACTTAAATCTCATTTACAAGCGATTTTAAATCAAAAAA
AACAATTGCTAACTTTAGAAACGGAAGATCATTCTCCTTTTGTTATTTTAATGGTTGGCGTGAATGGAGCTGGTAAAACA
ACTACCATAGGAAAATTAGCAAAGCAATTTCAACAGCAGGGTAAAAAAGTGATGTTAGCTGCGGGAGATACCTTTAGAGC
TGCAGCGGTAGAACAATTACTTGTTTGGGGGGAGCGAAATGATATTCCTGTTATTGCCCAACATACAGGGGCTGATAGTG
CGTCAGTCATTTTTGATGCGCTGCAGGCCGCTAAAGCACGAAAAATAGATGTCTTAATTGCAGATACGGCAGGACGATTA
CATACTCAAAGCAATTTAATGGAAGAATTGAAAAAAGTAAAAAGGGTATTACAAAAACTTTGTCCTGAAGCGCCTCATGA
AACAATGTTGATATTAGATGCAACTATAGGGCAAAATGCATTAGTTCAGGCAAAGCAATTTAATGAAGCGGTTGGATTAA
CGGGCATTACCATGACCAAATTGGATGGTACAGCTAAAGGCGGAATTTTGTTTGCTATTGCTAATGAACTAGGGATACCC
TTTCGTTATATAGGGATTGGTGAGGGAATAGAAGATCTTCAACCCTTCGATGCTGCGCAATTTGTTGGTGCATTATTTAA
TGATCACATTTGA
ATGATTAAATGGTTCAAACGCAGTCACACTCCTACCTCTTCAGAAGCTGATGAGTCCCAGCACAAAGAAGAGCTATTACC
GCAAGCCCCTGTGAAGGAGGTGGAGCAAGAGCAAGAGCCTGTAAAAGAAGGATTTTTTGCTCGGTTTAGGAAAAGTTTAA
GTAAAACGCGTCATCAGTTAGGTGATGGTATTGGCCGGTTATTGTTAGGAAAAAAAGAAATCAGCCAAGATTTGCTGGAT
GAGCTAGAAACTCTTTTAATCAGTGCTGATTTGGGTATAGAAACCACACAAATGGTATTAAAGCAATTGGCAGAAGGCTT
GGCACGCAAGCAATTATCTGACGGTGATGCGGTTTATGACGCACTTAAATCTCATTTACAAGCGATTTTAAATCAAAAAA
AACAATTGCTAACTTTAGAAACGGAAGATCATTCTCCTTTTGTTATTTTAATGGTTGGCGTGAATGGAGCTGGTAAAACA
ACTACCATAGGAAAATTAGCAAAGCAATTTCAACAGCAGGGTAAAAAAGTGATGTTAGCTGCGGGAGATACCTTTAGAGC
TGCAGCGGTAGAACAATTACTTGTTTGGGGGGAGCGAAATGATATTCCTGTTATTGCCCAACATACAGGGGCTGATAGTG
CGTCAGTCATTTTTGATGCGCTGCAGGCCGCTAAAGCACGAAAAATAGATGTCTTAATTGCAGATACGGCAGGACGATTA
CATACTCAAAGCAATTTAATGGAAGAATTGAAAAAAGTAAAAAGGGTATTACAAAAACTTTGTCCTGAAGCGCCTCATGA
AACAATGTTGATATTAGATGCAACTATAGGGCAAAATGCATTAGTTCAGGCAAAGCAATTTAATGAAGCGGTTGGATTAA
CGGGCATTACCATGACCAAATTGGATGGTACAGCTAAAGGCGGAATTTTGTTTGCTATTGCTAATGAACTAGGGATACCC
TTTCGTTATATAGGGATTGGTGAGGGAATAGAAGATCTTCAACCCTTCGATGCTGCGCAATTTGTTGGTGCATTATTTAA
TGATCACATTTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
51.404 |
100 |
0.523 |