Detailed information    

insolico Bioinformatically predicted

Overview


Name   HI0659   Type   Machinery gene
Locus tag   ELZ64_RS07870 Genome accession   NZ_LR134169
Coordinates   1654109..1654402 (-) Length   97 a.a.
NCBI ID   WP_005598477.1    Uniprot ID   A3N205
Organism   Actinobacillus lignieresii strain NCTC10568     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1649109..1659402
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ64_RS07840 (NCTC10568_01674) artM 1649435..1650118 (-) 684 WP_126375105.1 arginine ABC transporter permease ArtM -
  ELZ64_RS07845 (NCTC10568_01675) artQ 1650118..1650789 (-) 672 WP_126375106.1 arginine ABC transporter permease ArtQ -
  ELZ64_RS07850 (NCTC10568_01676) - 1650795..1651514 (-) 720 WP_115587461.1 transporter substrate-binding domain-containing protein -
  ELZ64_RS07855 (NCTC10568_01677) artP 1651535..1652269 (-) 735 WP_115587462.1 arginine ABC transporter ATP-binding protein ArtP -
  ELZ64_RS07860 (NCTC10568_01678) - 1652499..1652996 (-) 498 WP_115587463.1 YbhB/YbcL family Raf kinase inhibitor-like protein -
  ELZ64_RS07865 (NCTC10568_01679) - 1653069..1654031 (+) 963 WP_126375527.1 calcium/sodium antiporter -
  ELZ64_RS07870 (NCTC10568_01680) HI0659 1654109..1654402 (-) 294 WP_005598477.1 helix-turn-helix domain-containing protein Machinery gene
  ELZ64_RS11870 - 1654383..1654583 (-) 201 WP_338418677.1 type II toxin-antitoxin system RelE/ParE family toxin -
  ELZ64_RS07880 (NCTC10568_01681) - 1654933..1656684 (+) 1752 WP_126375107.1 protein-disulfide reductase DsbD -
  ELZ64_RS07885 (NCTC10568_01682) - 1656743..1657312 (+) 570 WP_115587467.1 elongation factor P hydroxylase -
  ELZ64_RS07890 (NCTC10568_01683) rsmI 1657356..1658210 (-) 855 WP_115587468.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -

Sequence


Protein


Download         Length: 97 a.a.        Molecular weight: 10935.81 Da        Isoelectric Point: 10.3120

>NTDB_id=1118710 ELZ64_RS07870 WP_005598477.1 1654109..1654402(-) (HI0659) [Actinobacillus lignieresii strain NCTC10568]
MSPIGSSWTSFEQEIFDESEIAETQFRIRLILEIIETRQQLGISQRKLEKLSGVKQSMIARVEKGSVNPSLATVLKLLVP
LGKTLQIVPLDKNKTVR

Nucleotide


Download         Length: 294 bp        

>NTDB_id=1118710 ELZ64_RS07870 WP_005598477.1 1654109..1654402(-) (HI0659) [Actinobacillus lignieresii strain NCTC10568]
ATGAGCCCTATTGGTTCTAGTTGGACATCGTTTGAACAAGAAATTTTTGACGAGTCGGAAATAGCGGAAACTCAGTTTCG
CATACGACTTATTTTAGAAATCATTGAAACCCGTCAGCAGCTCGGTATTTCTCAACGAAAATTGGAGAAATTAAGCGGCG
TAAAACAATCTATGATTGCTCGGGTAGAAAAAGGCTCGGTTAATCCGTCGTTGGCGACGGTATTAAAGTTGCTTGTGCCG
TTGGGGAAAACTTTACAAATCGTACCGTTAGATAAAAACAAAACGGTACGTTAA

Domains


Predicted by InterproScan.

(35-86)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A3N205

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

66.667

92.784

0.619


Multiple sequence alignment