Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | EL050_RS10425 | Genome accession | NZ_LR134165 |
| Coordinates | 2036994..2037422 (+) | Length | 142 a.a. |
| NCBI ID | WP_025809943.1 | Uniprot ID | - |
| Organism | Bacillus paralicheniformis strain NCTC8721 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 2031994..2042422
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL050_RS10400 (NCTC8721_02134) | - | 2032252..2032860 (+) | 609 | WP_025809937.1 | flavin reductase family protein | - |
| EL050_RS10405 (NCTC8721_02135) | wrbA | 2033062..2033676 (+) | 615 | WP_020451586.1 | NAD(P)H:quinone oxidoreductase | - |
| EL050_RS22385 | - | 2033986..2034126 (+) | 141 | WP_023857597.1 | hypothetical protein | - |
| EL050_RS10410 (NCTC8721_02136) | - | 2034119..2034952 (+) | 834 | WP_020451587.1 | prohibitin family protein | - |
| EL050_RS10415 (NCTC8721_02137) | - | 2035041..2035802 (+) | 762 | WP_025809940.1 | hypothetical protein | - |
| EL050_RS10420 (NCTC8721_02138) | - | 2035862..2036701 (+) | 840 | WP_025809941.1 | thymidylate synthase | - |
| EL050_RS10425 (NCTC8721_02139) | nucA/comI | 2036994..2037422 (+) | 429 | WP_025809943.1 | NucA/NucB deoxyribonuclease domain-containing protein | Machinery gene |
| EL050_RS10435 (NCTC8721_02140) | lexA | 2037621..2038244 (-) | 624 | WP_020451591.1 | transcriptional repressor LexA | - |
| EL050_RS10440 (NCTC8721_02141) | yneA | 2038396..2038707 (+) | 312 | WP_020451592.1 | cell division suppressor protein YneA | - |
| EL050_RS10445 (NCTC8721_02142) | - | 2038726..2039373 (+) | 648 | WP_020451593.1 | recombinase family protein | - |
| EL050_RS10450 (NCTC8721_02143) | - | 2039439..2039672 (+) | 234 | WP_020451594.1 | DUF896 domain-containing protein | - |
| EL050_RS10455 (NCTC8721_02144) | tkt | 2039836..2041839 (+) | 2004 | WP_020451595.1 | transketolase | - |
Sequence
Protein
Download Length: 142 a.a. Molecular weight: 15404.40 Da Isoelectric Point: 8.4717
>NTDB_id=1118596 EL050_RS10425 WP_025809943.1 2036994..2037422(+) (nucA/comI) [Bacillus paralicheniformis strain NCTC8721]
MIKKWAIHLLFSALVLLGLSGGAAYSPQHAEGVARYDDVLYFPASRYPETGAHISDAIKAGHSDVCTIERSGADKRRQES
LKGIPTKPGFDRDEWPMAMCEEGGKGASVRYVSSSDNRGAGSWVGNRLSGYADGTRILFIVR
MIKKWAIHLLFSALVLLGLSGGAAYSPQHAEGVARYDDVLYFPASRYPETGAHISDAIKAGHSDVCTIERSGADKRRQES
LKGIPTKPGFDRDEWPMAMCEEGGKGASVRYVSSSDNRGAGSWVGNRLSGYADGTRILFIVR
Nucleotide
Download Length: 429 bp
>NTDB_id=1118596 EL050_RS10425 WP_025809943.1 2036994..2037422(+) (nucA/comI) [Bacillus paralicheniformis strain NCTC8721]
ATGATCAAAAAATGGGCGATTCATCTGCTGTTTTCCGCATTGGTGCTGCTTGGGCTTTCGGGAGGGGCTGCATATTCTCC
TCAGCATGCCGAAGGCGTTGCAAGGTATGATGACGTATTGTATTTTCCGGCATCGCGCTATCCTGAAACAGGTGCTCATA
TAAGCGATGCGATCAAAGCGGGCCATTCAGATGTCTGCACAATTGAAAGATCTGGAGCGGATAAGCGCCGTCAGGAATCA
TTAAAGGGGATTCCGACTAAGCCGGGCTTTGACCGTGACGAATGGCCGATGGCCATGTGTGAAGAAGGGGGAAAAGGAGC
GTCGGTCAGATATGTCAGCTCATCGGATAACCGCGGAGCCGGCTCCTGGGTCGGGAACAGGCTGAGCGGTTACGCTGACG
GGACGAGAATTTTGTTTATCGTTCGATAA
ATGATCAAAAAATGGGCGATTCATCTGCTGTTTTCCGCATTGGTGCTGCTTGGGCTTTCGGGAGGGGCTGCATATTCTCC
TCAGCATGCCGAAGGCGTTGCAAGGTATGATGACGTATTGTATTTTCCGGCATCGCGCTATCCTGAAACAGGTGCTCATA
TAAGCGATGCGATCAAAGCGGGCCATTCAGATGTCTGCACAATTGAAAGATCTGGAGCGGATAAGCGCCGTCAGGAATCA
TTAAAGGGGATTCCGACTAAGCCGGGCTTTGACCGTGACGAATGGCCGATGGCCATGTGTGAAGAAGGGGGAAAAGGAGC
GTCGGTCAGATATGTCAGCTCATCGGATAACCGCGGAGCCGGCTCCTGGGTCGGGAACAGGCTGAGCGGTTACGCTGACG
GGACGAGAATTTTGTTTATCGTTCGATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
58.73 |
88.732 |
0.521 |