Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   EL050_RS02460 Genome accession   NZ_LR134165
Coordinates   487372..488325 (+) Length   317 a.a.
NCBI ID   WP_025810137.1    Uniprot ID   -
Organism   Bacillus paralicheniformis strain NCTC8721     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 482372..493325
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL050_RS02445 (NCTC8721_00504) - 482420..483847 (+) 1428 WP_020450167.1 HAMP domain-containing sensor histidine kinase -
  EL050_RS02450 (NCTC8721_00505) - 483879..485597 (-) 1719 WP_025810141.1 methyl-accepting chemotaxis protein -
  EL050_RS02455 (NCTC8721_00506) - 485733..487094 (-) 1362 WP_025810139.1 aspartate kinase -
  EL050_RS02460 (NCTC8721_00507) ceuB 487372..488325 (+) 954 WP_025810137.1 ABC transporter permease Machinery gene
  EL050_RS02465 (NCTC8721_00508) - 488315..489259 (+) 945 WP_126430388.1 iron chelate uptake ABC transporter family permease subunit -
  EL050_RS02470 (NCTC8721_00509) - 489259..490017 (+) 759 WP_025810135.1 ABC transporter ATP-binding protein -
  EL050_RS02475 (NCTC8721_00510) - 490032..490979 (+) 948 WP_023855630.1 siderophore ABC transporter substrate-binding protein -
  EL050_RS02480 (NCTC8721_00511) - 491159..492580 (-) 1422 WP_025810132.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35073.45 Da        Isoelectric Point: 10.1004

>NTDB_id=1118571 EL050_RS02460 WP_025810137.1 487372..488325(+) (ceuB) [Bacillus paralicheniformis strain NCTC8721]
MKLRYLLLMLIILSISSIFIGVKELSPLDLFRLNEDEIQTLYISRIPRLISIVLAGMSLSICGLIMQQLTRNKFVSPTTA
GTMDWARLGVIIAIVLFSSAGIVVKILFAFVFALFGSFLFVKILDRIKFKDAIFIPLVGMMLGSVVSAISTFMAYQYNII
QNVNAWFEGNFSLVMKGRYELLFLSIPLVIIAYLFANKFTLAGMGESFSINLGLNYKRVVNIGLIIVSIISSVVILTVGT
LPFLGLIIPNIVSIYRGDHLKNSLPHTAVLGAVFVLFCDIAGRLVIYPYEISVGLMVGIIGSGVFLYLLLRRKAYAS

Nucleotide


Download         Length: 954 bp        

>NTDB_id=1118571 EL050_RS02460 WP_025810137.1 487372..488325(+) (ceuB) [Bacillus paralicheniformis strain NCTC8721]
ATGAAATTACGATACTTATTGCTAATGCTCATCATTCTTTCAATCAGCTCGATATTCATCGGCGTTAAGGAGCTTTCGCC
TCTTGACCTTTTCCGCTTGAACGAGGACGAAATTCAAACGCTTTACATAAGCAGAATCCCGCGCTTGATCAGCATCGTGC
TTGCGGGAATGAGCTTGAGCATCTGCGGGCTGATCATGCAGCAGCTGACGCGCAATAAATTTGTTTCACCGACGACCGCT
GGAACGATGGATTGGGCGAGGCTCGGCGTGATCATTGCGATCGTGCTTTTTTCGTCTGCAGGAATTGTGGTCAAAATACT
GTTTGCCTTTGTTTTTGCACTGTTTGGCAGCTTTTTGTTCGTCAAAATTTTGGACAGAATCAAGTTCAAAGATGCGATCT
TCATCCCTCTCGTCGGTATGATGCTCGGAAGTGTTGTCAGCGCCATCTCCACTTTCATGGCTTATCAGTACAATATCATT
CAAAACGTCAATGCATGGTTTGAAGGGAATTTTTCGCTGGTCATGAAGGGGAGGTATGAGCTCTTATTTCTGAGTATACC
GCTCGTTATCATTGCCTATCTGTTCGCCAATAAATTTACGTTGGCCGGGATGGGGGAGTCTTTTTCCATCAATCTTGGAT
TGAATTATAAGCGGGTGGTCAATATCGGATTGATCATCGTATCTATTATTTCGTCCGTCGTCATCCTGACGGTCGGTACG
CTTCCCTTTTTGGGATTGATCATCCCGAACATCGTGTCCATCTACAGGGGAGATCATTTGAAAAACAGCCTGCCTCATAC
GGCGGTTCTCGGAGCCGTTTTTGTCTTGTTTTGCGATATAGCGGGACGTCTCGTCATTTACCCGTACGAAATTTCGGTTG
GTTTGATGGTCGGCATCATCGGGAGCGGCGTTTTTCTTTACTTGCTTTTAAGGAGAAAAGCCTATGCGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.899

99.685

0.517

Multiple sequence alignment