Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   BLEG1_RS12285 Genome accession   NZ_CP003923
Coordinates   2464802..2464990 (-) Length   62 a.a.
NCBI ID   WP_038481463.1    Uniprot ID   A0A060LZC6
Organism   Shouchella lehensis G1     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2459802..2469990
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BLEG1_RS12270 (BleG1_2540) fabF 2462162..2463403 (-) 1242 WP_038481453.1 beta-ketoacyl-ACP synthase II -
  BLEG1_RS12275 (BleG1_2541) - 2463448..2464383 (-) 936 WP_038481457.1 beta-ketoacyl-ACP synthase III -
  BLEG1_RS12280 (BleG1_2542) - 2464494..2464805 (-) 312 WP_038481460.1 hypothetical protein -
  BLEG1_RS12285 (BleG1_2543) comZ 2464802..2464990 (-) 189 WP_038481463.1 ComZ family protein Regulator
  BLEG1_RS12290 (BleG1_2544) - 2465139..2466743 (+) 1605 WP_084167481.1 peptide chain release factor 3 -
  BLEG1_RS12295 (BleG1_2545) - 2466770..2467513 (-) 744 WP_038481466.1 STAS domain-containing protein -
  BLEG1_RS12300 (BleG1_2546) - 2467500..2468159 (-) 660 WP_038481469.1 B12-binding domain-containing protein -
  BLEG1_RS12305 (BleG1_2547) - 2468261..2468929 (-) 669 WP_038481472.1 NAD-dependent epimerase/dehydratase family protein -
  BLEG1_RS12310 (BleG1_2548) - 2468962..2469618 (-) 657 WP_038481475.1 hypothetical protein -
  BLEG1_RS12315 (BleG1_2549) - 2469770..2469949 (-) 180 WP_035395400.1 YjzC family protein -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7131.25 Da        Isoelectric Point: 4.1370

>NTDB_id=111855 BLEG1_RS12285 WP_038481463.1 2464802..2464990(-) (comZ) [Shouchella lehensis G1]
MTDQEKNMAFMQIAMKYVPEAKELIKAKGIELGFDDLQPMLALFTKVMNEAYELGQKDSEEE

Nucleotide


Download         Length: 189 bp        

>NTDB_id=111855 BLEG1_RS12285 WP_038481463.1 2464802..2464990(-) (comZ) [Shouchella lehensis G1]
ATGACTGATCAAGAAAAAAATATGGCATTTATGCAGATTGCGATGAAATATGTTCCAGAGGCTAAAGAATTGATAAAAGC
AAAAGGGATTGAACTAGGATTTGACGATTTGCAGCCAATGCTAGCATTGTTTACCAAAGTAATGAATGAAGCGTATGAGT
TAGGTCAGAAAGATAGCGAAGAAGAATGA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(5-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A060LZC6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

55.932

95.161

0.532

Multiple sequence alignment