Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   ELZ51_RS10555 Genome accession   NZ_LR134094
Coordinates   2101720..2102433 (+) Length   237 a.a.
NCBI ID   WP_003053082.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2096720..2107433
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ51_RS10545 (NCTC4669_02223) treC 2097790..2099418 (-) 1629 WP_126427476.1 alpha,alpha-phosphotrehalase -
  ELZ51_RS10550 (NCTC4669_02224) treP 2099485..2101509 (-) 2025 WP_126427478.1 PTS system trehalose-specific EIIBC component -
  ELZ51_RS10555 (NCTC4669_02225) treR 2101720..2102433 (+) 714 WP_003053082.1 trehalose operon repressor Regulator
  ELZ51_RS10565 (NCTC4669_02226) - 2102715..2103053 (-) 339 WP_126427480.1 winged helix-turn-helix transcriptional regulator -
  ELZ51_RS10570 (NCTC4669_02227) - 2103239..2104096 (+) 858 WP_126427482.1 VOC family protein -
  ELZ51_RS10575 (NCTC4669_02228) yaaA 2104138..2104869 (+) 732 WP_126427484.1 peroxide stress protein YaaA -
  ELZ51_RS10580 (NCTC4669_02229) nrdG 2105041..2105655 (-) 615 WP_115253186.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  ELZ51_RS10585 (NCTC4669_02230) - 2105659..2106162 (-) 504 WP_115276473.1 GNAT family N-acetyltransferase -
  ELZ51_RS10590 (NCTC4669_02231) - 2106171..2107106 (-) 936 WP_126427486.1 Gfo/Idh/MocA family protein -
  ELZ51_RS11170 (NCTC4669_02232) - 2107135..2107281 (-) 147 WP_164549241.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27564.72 Da        Isoelectric Point: 9.4757

>NTDB_id=1118304 ELZ51_RS10555 WP_003053082.1 2101720..2102433(+) (treR) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKQHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDHDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=1118304 ELZ51_RS10555 WP_003053082.1 2101720..2102433(+) (treR) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATCAACAAAGACTTTTACAAAGAAGGGGACTTTTTACC
TACTGAAATAGAATTGAGTCAACAGTACCAGGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCGCTTCTCACCAAGGCAG
GCCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAGCAGCATCAGATCATGTTCCCCATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGTTTGGTCTGGCGTGTTACGCGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATCTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCATGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.803

98.734

0.679

Multiple sequence alignment