Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   ELZ51_RS07690 Genome accession   NZ_LR134094
Coordinates   1520682..1521719 (-) Length   345 a.a.
NCBI ID   WP_126426950.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1515682..1526719
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ51_RS07665 (NCTC4669_01629) - 1515704..1516645 (-) 942 WP_037584987.1 ABC transporter permease subunit -
  ELZ51_RS07670 (NCTC4669_01630) - 1516647..1518125 (-) 1479 WP_126426948.1 sugar ABC transporter ATP-binding protein -
  ELZ51_RS07675 (NCTC4669_01631) rbsD 1518141..1518539 (-) 399 WP_003051896.1 D-ribose pyranase -
  ELZ51_RS07680 (NCTC4669_01632) rbsK 1518514..1519425 (-) 912 WP_003051898.1 ribokinase -
  ELZ51_RS07685 (NCTC4669_01633) - 1519418..1520401 (-) 984 WP_003051900.1 LacI family DNA-binding transcriptional regulator -
  ELZ51_RS07690 (NCTC4669_01634) sepM 1520682..1521719 (-) 1038 WP_126426950.1 SepM family pheromone-processing serine protease Regulator
  ELZ51_RS07695 (NCTC4669_01635) coaD 1521706..1522197 (-) 492 WP_126426952.1 pantetheine-phosphate adenylyltransferase -
  ELZ51_RS07700 (NCTC4669_01636) rsmD 1522187..1522726 (-) 540 WP_126427621.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  ELZ51_RS07705 (NCTC4669_01637) asnA 1522919..1523911 (-) 993 WP_003051908.1 aspartate--ammonia ligase -
  ELZ51_RS07710 (NCTC4669_01638) arcC 1524237..1525187 (-) 951 WP_003051912.1 carbamate kinase -
  ELZ51_RS07715 (NCTC4669_01639) - 1525207..1526538 (-) 1332 WP_003051914.1 dipeptidase -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37574.14 Da        Isoelectric Point: 9.5393

>NTDB_id=1118289 ELZ51_RS07690 WP_126426950.1 1520682..1521719(-) (sepM) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
MKTIKKIKWWLISLIALVALLIVLFFPLPYYVEMPGGAYDIRSVVKVNGKEDKDKGSYQFVAVSLSRASLAQLLYAWLTP
FTEISSVEDTTGGYSDTDYIRINQFYMETSQNAAVYQALTLADKPVTLDYKGVYVLDVSKDSTFKGALNLADTVTGVNHK
QFTSSTELVDYVSHLKLGDKVTVQFISNSEPKSETGRIIKLKNGKNGIGIALTDHTKVNSADKIEFSTQGVGGPSAGLMF
TLDIYDQINKEDLRKGRHIAGTGTIGKNGEVGDIGGAGLKVVAAADAGAEIFFVPNNPVDKAVKKANPKAISNYEEAKRA
AKQLKTKMKIVPVTTVQDALAYLRQ

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=1118289 ELZ51_RS07690 WP_126426950.1 1520682..1521719(-) (sepM) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
ATGAAAACAATTAAAAAAATTAAATGGTGGCTGATTAGCCTAATTGCCCTCGTGGCTTTGCTTATCGTCCTCTTTTTCCC
TCTTCCTTACTATGTTGAAATGCCTGGCGGAGCCTATGATATTCGATCTGTGGTCAAGGTTAATGGCAAAGAAGATAAAG
ATAAAGGCTCCTATCAGTTTGTGGCAGTCAGTCTCAGTCGAGCGAGTTTGGCTCAGTTGCTCTATGCTTGGCTAACCCCT
TTTACTGAAATCAGTTCAGTTGAGGACACCACAGGCGGTTACAGCGATACAGACTATATCCGCATTAATCAATTCTACAT
GGAAACCTCACAAAATGCTGCGGTCTATCAGGCATTGACCTTGGCAGACAAACCAGTTACTTTGGACTACAAAGGGGTCT
ATGTGTTAGATGTTAGCAAGGATTCAACCTTTAAAGGTGCTTTAAACTTAGCAGATACGGTAACGGGAGTGAATCACAAA
CAATTTACGAGTTCAACAGAACTTGTGGACTATGTCTCTCATTTAAAACTTGGTGATAAGGTGACTGTGCAGTTTATTAG
TAATAGCGAACCTAAGTCTGAAACAGGTCGTATCATCAAACTAAAAAATGGTAAAAATGGTATCGGCATTGCTTTAACAG
ATCATACTAAAGTCAATTCAGCAGATAAAATCGAGTTTAGTACCCAAGGTGTTGGAGGTCCTAGCGCAGGCTTAATGTTT
ACACTAGATATCTACGATCAAATTAATAAAGAAGACCTTCGTAAAGGAAGACATATCGCCGGGACAGGAACTATTGGTAA
AAATGGTGAAGTTGGAGATATTGGCGGTGCGGGTCTTAAGGTCGTTGCTGCTGCAGATGCTGGTGCTGAGATTTTCTTTG
TGCCGAATAATCCTGTGGATAAAGCTGTTAAAAAAGCCAATCCAAAAGCTATTAGCAATTATGAAGAGGCCAAGCGAGCA
GCCAAGCAGTTAAAAACAAAAATGAAAATTGTTCCTGTAACAACTGTTCAGGATGCCCTAGCCTACCTTCGTCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

71.594

100

0.716


Multiple sequence alignment