Detailed information    

insolico Bioinformatically predicted

Overview


Name   clpE   Type   Regulator
Locus tag   ELZ51_RS07510 Genome accession   NZ_LR134094
Coordinates   1481248..1483539 (+) Length   763 a.a.
NCBI ID   WP_126426928.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669     
Function   repress competence development (at the early growth phase) (predicted from homology)   
Competence regulation

Genomic Context


Location: 1476248..1488539
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ51_RS07485 (NCTC4669_01591) feoB 1476338..1478497 (-) 2160 WP_126426924.1 ferrous iron transport protein B -
  ELZ51_RS07490 (NCTC4669_01592) - 1478494..1478973 (-) 480 WP_115246231.1 FeoA family protein -
  ELZ51_RS07495 (NCTC4669_01593) - 1479171..1479905 (-) 735 WP_115246232.1 amino acid ABC transporter ATP-binding protein -
  ELZ51_RS07500 (NCTC4669_01594) - 1479905..1480591 (-) 687 WP_126426926.1 amino acid ABC transporter permease -
  ELZ51_RS07505 (NCTC4669_01595) - 1480719..1480949 (-) 231 WP_003051836.1 DUF1797 family protein -
  ELZ51_RS07510 (NCTC4669_01596) clpE 1481248..1483539 (+) 2292 WP_126426928.1 ATP-dependent Clp protease ATP-binding subunit Regulator
  ELZ51_RS07515 (NCTC4669_01597) - 1483657..1484112 (+) 456 WP_126426930.1 NUDIX domain-containing protein -
  ELZ51_RS07520 (NCTC4669_01598) - 1484162..1484464 (+) 303 WP_003051842.1 DUF1827 family protein -
  ELZ51_RS07525 (NCTC4669_01599) ileS 1484868..1487669 (-) 2802 WP_126426932.1 isoleucine--tRNA ligase -

Sequence


Protein


Download         Length: 763 a.a.        Molecular weight: 84970.23 Da        Isoelectric Point: 5.2743

>NTDB_id=1118288 ELZ51_RS07510 WP_126426928.1 1481248..1483539(+) (clpE) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
MLCQNCNLNESTIHLYTNVNGKQKQVDLCQNCYQIMKTDPTNPILGGLNGGQRAQERSSNPFFDDFFGDLNNFRAFGNLP
NTPPTQAGQNGNGGGRHGGHFNGQRPTQPQTQNQQVKGLLEEFGINVTDIARHGDIDPVIGRDDEITRVIEILNRRTKNN
PVLIGEPGVGKTAVVEGLAQKIVDGTVPHKLQGKQVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRQRKDVILFIDEIHE
IVGAGSAGDGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPSVEETITILKGIQPKYEDYHH
VKYSPAAIEAAAHLSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKEIDKRLIEAENLKAQATRDEDYERAAYFRDQ
IAKYKEMQAQKVDEQDIPIITEKTIEAIIEQKTNIPVGDLKEKEQSQLVNLANDLKAHVIGQDDAVDKIAKAIRRNRVGL
GTPNRPIGSFLFVGPTGVGKTELSKQLAIELFGSADNMIRFDMSEYMEKHAVAKLVGAPPGYVGYEEAGQLTEQVRRNPY
SLILLDEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTGKSEASVGFGAAREGRTSSVLGELSNFFS
PEFMNRFDGIIEFKALSKDNLLHIVDLMLEDVNKRLGYNGIHLDVTQKVKEKLVDLGYDPKMGARPLRRTIQDYIEDAIT
DYYLEHPTEKDLRAIMTSNGNIMIKAAKKDETVTAKQDQTDEN

Nucleotide


Download         Length: 2292 bp        

>NTDB_id=1118288 ELZ51_RS07510 WP_126426928.1 1481248..1483539(+) (clpE) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
ATGCTTTGTCAAAATTGTAATTTAAACGAATCAACCATCCACCTCTACACGAATGTTAATGGAAAACAAAAACAAGTTGA
CCTTTGTCAAAACTGTTATCAAATCATGAAGACTGACCCTACTAATCCTATTTTAGGTGGTCTAAATGGAGGTCAAAGAG
CCCAAGAACGCTCATCCAACCCCTTCTTTGATGACTTTTTTGGTGATTTAAATAATTTTAGAGCCTTTGGCAACCTTCCA
AATACCCCGCCTACACAAGCAGGCCAAAATGGCAACGGAGGAGGACGCCATGGTGGTCATTTCAATGGGCAACGTCCCAC
TCAGCCACAAACACAAAATCAGCAAGTAAAGGGCTTGTTAGAAGAATTTGGGATTAATGTTACAGATATTGCAAGACATG
GTGATATTGACCCTGTCATCGGTCGAGATGACGAGATTACACGTGTCATCGAAATCCTTAACCGTCGGACTAAAAATAAC
CCTGTGCTTATTGGGGAACCAGGAGTTGGTAAAACAGCTGTTGTAGAAGGTCTAGCCCAGAAAATTGTAGATGGCACAGT
ACCTCACAAATTGCAAGGTAAGCAAGTGATTCGTCTAGATGTGGTTAGTCTTGTTCAAGGCACAGGTATCCGTGGTCAAT
TCGAAGAACGCATGCAAAAATTAATGGAAGAAATTCGTCAACGTAAAGATGTGATTCTCTTTATTGATGAAATTCATGAA
ATTGTAGGTGCTGGTTCTGCTGGAGATGGCAATATGGATGCTGGCAATATTTTAAAACCAGCCTTGGCCCGTGGTGAGTT
GCAACTCGTTGGTGCTACTACCTTAAATGAATACCGTATTATTGAAAAAGATGCTGCCTTGGAGCGGCGGATGCAGCCGG
TGAAAGTTGACGAACCTTCTGTAGAAGAAACCATTACCATCTTAAAAGGTATCCAGCCCAAATATGAAGACTATCATCAT
GTCAAATATAGCCCAGCAGCTATCGAGGCTGCTGCACACTTATCCAATCGCTACATTCAAGACCGATTCCTCCCTGATAA
GGCCATTGACCTTCTGGACGAAGCTGGTTCAAAAATGAATTTAACCCTTAATTTTGTTGACCCTAAAGAGATTGACAAAC
GTCTGATTGAAGCAGAAAACCTCAAGGCTCAAGCAACTCGTGACGAAGATTACGAACGAGCAGCCTATTTCCGAGATCAA
ATTGCGAAATACAAGGAAATGCAAGCTCAAAAAGTCGACGAACAGGATATTCCTATCATTACTGAAAAAACCATTGAAGC
CATCATTGAACAAAAAACCAATATTCCAGTTGGCGATTTGAAAGAAAAAGAACAATCTCAACTCGTTAATTTGGCTAATG
ATTTGAAAGCTCACGTGATTGGCCAAGATGATGCCGTTGACAAAATTGCCAAGGCCATTCGCCGGAACCGTGTGGGATTA
GGAACTCCAAATCGTCCTATTGGTTCTTTCCTATTCGTTGGGCCAACAGGTGTTGGTAAAACAGAATTGTCAAAGCAACT
AGCTATTGAACTCTTTGGCTCTGCTGACAATATGATTCGCTTTGACATGTCCGAATACATGGAAAAACATGCCGTTGCTA
AATTAGTCGGGGCTCCTCCTGGATATGTGGGCTATGAAGAAGCTGGCCAGTTAACAGAACAAGTTCGCCGCAATCCATAT
TCACTTATTCTCTTAGATGAGGTGGAAAAGGCTCATCCTGACGTCATGCACATGTTCTTACAAGTTCTTGATGATGGCCG
TTTAACAGATGGTCAAGGACGAACAGTCAGCTTCAAGGATACTATTATTATCATGACCTCTAATGCCGGAACAGGTAAAA
GCGAAGCTTCTGTTGGATTTGGTGCAGCTAGAGAAGGACGAACAAGCTCTGTCCTTGGTGAATTAAGTAACTTCTTCAGC
CCAGAGTTCATGAACCGTTTCGATGGTATTATTGAATTTAAGGCCTTGAGCAAAGATAACCTCTTGCATATCGTTGATTT
AATGCTGGAAGATGTTAATAAGCGCTTAGGCTATAATGGAATTCACCTTGATGTGACACAAAAAGTCAAAGAAAAATTAG
TAGATTTAGGCTATGATCCTAAAATGGGTGCTCGACCACTCCGTCGTACCATCCAAGATTATATCGAAGATGCGATTACG
GACTACTATTTGGAACACCCCACTGAAAAGGACTTGCGTGCCATAATGACAAGTAACGGTAATATCATGATTAAAGCTGC
CAAAAAAGATGAAACGGTAACAGCTAAACAAGATCAGACCGACGAGAACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  clpE Streptococcus mutans UA159

85.714

99.083

0.849

  clpE Streptococcus pneumoniae Rx1

83.926

99.476

0.835

  clpE Streptococcus pneumoniae D39

83.926

99.476

0.835

  clpE Streptococcus pneumoniae R6

83.926

99.476

0.835

  clpE Streptococcus pneumoniae TIGR4

83.794

99.476

0.834

  clpC Lactococcus lactis subsp. cremoris KW2

76.599

96.33

0.738

  clpC Bacillus subtilis subsp. subtilis str. 168

49.781

89.777

0.447

  clpC Lactococcus lactis subsp. lactis strain DGCC12653

46.308

85.19

0.394

  clpC Streptococcus pneumoniae Rx1

47.84

81.913

0.392

  clpC Streptococcus pneumoniae D39

47.84

81.913

0.392

  clpC Streptococcus pneumoniae TIGR4

47.84

81.913

0.392

  clpC Streptococcus mutans UA159

47.581

81.258

0.387

  clpC Streptococcus thermophilus LMD-9

46.215

83.093

0.384

  clpC Streptococcus thermophilus LMG 18311

45.899

83.093

0.381


Multiple sequence alignment