Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | ELZ60_RS06855 | Genome accession | NZ_LR134090 |
| Coordinates | 1354562..1355632 (+) | Length | 356 a.a. |
| NCBI ID | WP_000776418.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain NCTC9555 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1349562..1360632
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ELZ60_RS06825 (NCTC9555_01291) | - | 1349985..1351448 (+) | 1464 | WP_001017867.1 | rhomboid family protein | - |
| ELZ60_RS06830 | - | 1351429..1351632 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| ELZ60_RS06835 (NCTC9555_01292) | - | 1351629..1352615 (+) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| ELZ60_RS06840 (NCTC9555_01293) | - | 1352615..1352944 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| ELZ60_RS06845 (NCTC9555_01294) | - | 1352941..1353564 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| ELZ60_RS06850 (NCTC9555_01295) | comGA | 1353616..1354590 (+) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ELZ60_RS06855 (NCTC9555_01296) | comGB | 1354562..1355632 (+) | 1071 | WP_000776418.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ELZ60_RS06860 (NCTC9555_01297) | comGC | 1355646..1355957 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ELZ60_RS06865 (NCTC9555_01298) | comGD | 1355935..1356381 (+) | 447 | WP_001796473.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ELZ60_RS06870 (NCTC9555_01299) | comGE | 1356368..1356667 (+) | 300 | WP_000844409.1 | hypothetical protein | Machinery gene |
| ELZ60_RS06875 (NCTC9555_01300) | comGF | 1356585..1357082 (+) | 498 | WP_078061106.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ELZ60_RS06880 | - | 1357179..1357325 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| ELZ60_RS06885 | - | 1357315..1357839 (+) | 525 | WP_001015120.1 | shikimate kinase | - |
| ELZ60_RS06890 (NCTC9555_01302) | gcvT | 1357997..1359088 (+) | 1092 | WP_000093343.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| ELZ60_RS06895 (NCTC9555_01303) | gcvPA | 1359108..1360454 (+) | 1347 | WP_126509044.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 41461.91 Da Isoelectric Point: 10.1030
>NTDB_id=1118124 ELZ60_RS06855 WP_000776418.1 1354562..1355632(+) (comGB) [Staphylococcus aureus strain NCTC9555]
MKLQWINTFKLHSKKRQLSKAQQIDLLSNLCNLLKYGFTLYQSFQFLNLQMTYKNKQLGTTILSEISNGAPCNQILSLIG
YSDTIVMQVYLAERFGNIIDVLEETVNYMKVNRKSEQRLLKTLQYPLILVSIFIAMIIILNLTVIPQFQQLYTSMNIQLS
SFQKTLSFFITSLPTIIVVMLIIVSMLAIIMKLIYNKLNMLNKINFVMKLPLISGYFQLFKTYFVTNELVLFYKNGITLQ
SIVDVYINHSSDPFRQFLGKYLLTYSEMGYGLPQILEKLKCFKPQLIKFVLQGEKRGKLEVELKLYSQILVKQIEDKAIK
QTQFLQPILFLILGLFIVAIYLVIMLPMFQMMQSIK
MKLQWINTFKLHSKKRQLSKAQQIDLLSNLCNLLKYGFTLYQSFQFLNLQMTYKNKQLGTTILSEISNGAPCNQILSLIG
YSDTIVMQVYLAERFGNIIDVLEETVNYMKVNRKSEQRLLKTLQYPLILVSIFIAMIIILNLTVIPQFQQLYTSMNIQLS
SFQKTLSFFITSLPTIIVVMLIIVSMLAIIMKLIYNKLNMLNKINFVMKLPLISGYFQLFKTYFVTNELVLFYKNGITLQ
SIVDVYINHSSDPFRQFLGKYLLTYSEMGYGLPQILEKLKCFKPQLIKFVLQGEKRGKLEVELKLYSQILVKQIEDKAIK
QTQFLQPILFLILGLFIVAIYLVIMLPMFQMMQSIK
Nucleotide
Download Length: 1071 bp
>NTDB_id=1118124 ELZ60_RS06855 WP_000776418.1 1354562..1355632(+) (comGB) [Staphylococcus aureus strain NCTC9555]
GTGAAACTACAATGGATAAATACATTTAAACTACATTCTAAGAAGCGACAATTAAGTAAGGCCCAACAAATCGATTTACT
TTCAAATTTATGTAATTTGTTGAAATATGGTTTCACTCTGTATCAAAGTTTTCAATTTTTAAATCTTCAAATGACATATA
AAAATAAGCAATTAGGTACCACCATTCTAAGTGAAATTTCAAATGGTGCACCATGCAATCAGATATTATCACTGATAGGT
TATAGCGATACTATCGTCATGCAAGTATATTTGGCAGAAAGATTTGGCAATATCATAGACGTTCTAGAAGAAACCGTAAA
TTATATGAAAGTGAATAGAAAGTCAGAACAACGATTGTTAAAGACACTGCAATACCCCTTAATACTAGTTTCTATTTTTA
TTGCTATGATTATTATATTAAACCTCACAGTAATTCCACAGTTTCAACAATTATATACTTCTATGAATATTCAACTATCT
TCTTTTCAAAAAACATTGTCGTTTTTCATTACCAGCTTACCTACAATAATTGTAGTAATGCTCATAATAGTATCTATGTT
GGCTATTATTATGAAGTTGATTTATAACAAATTAAATATGCTCAATAAGATAAACTTTGTGATGAAACTACCGCTAATAT
CAGGCTATTTCCAATTATTTAAAACTTATTTTGTAACTAATGAATTAGTGTTGTTTTATAAAAATGGTATTACGCTTCAA
TCAATAGTAGACGTTTATATTAACCATAGTAGTGATCCATTTAGACAGTTTCTAGGTAAATACTTATTAACTTATTCAGA
AATGGGATATGGTTTACCTCAAATTTTAGAAAAACTAAAATGCTTTAAGCCTCAATTAATTAAGTTTGTGCTACAAGGTG
AAAAGAGAGGGAAGCTTGAAGTAGAACTAAAGTTATATTCGCAAATATTAGTAAAACAAATAGAAGATAAAGCGATAAAA
CAGACTCAGTTTTTACAGCCTATTTTATTTTTGATTTTAGGTTTATTTATTGTCGCAATTTATTTAGTAATTATGTTACC
AATGTTTCAAATGATGCAAAGTATAAAATAA
GTGAAACTACAATGGATAAATACATTTAAACTACATTCTAAGAAGCGACAATTAAGTAAGGCCCAACAAATCGATTTACT
TTCAAATTTATGTAATTTGTTGAAATATGGTTTCACTCTGTATCAAAGTTTTCAATTTTTAAATCTTCAAATGACATATA
AAAATAAGCAATTAGGTACCACCATTCTAAGTGAAATTTCAAATGGTGCACCATGCAATCAGATATTATCACTGATAGGT
TATAGCGATACTATCGTCATGCAAGTATATTTGGCAGAAAGATTTGGCAATATCATAGACGTTCTAGAAGAAACCGTAAA
TTATATGAAAGTGAATAGAAAGTCAGAACAACGATTGTTAAAGACACTGCAATACCCCTTAATACTAGTTTCTATTTTTA
TTGCTATGATTATTATATTAAACCTCACAGTAATTCCACAGTTTCAACAATTATATACTTCTATGAATATTCAACTATCT
TCTTTTCAAAAAACATTGTCGTTTTTCATTACCAGCTTACCTACAATAATTGTAGTAATGCTCATAATAGTATCTATGTT
GGCTATTATTATGAAGTTGATTTATAACAAATTAAATATGCTCAATAAGATAAACTTTGTGATGAAACTACCGCTAATAT
CAGGCTATTTCCAATTATTTAAAACTTATTTTGTAACTAATGAATTAGTGTTGTTTTATAAAAATGGTATTACGCTTCAA
TCAATAGTAGACGTTTATATTAACCATAGTAGTGATCCATTTAGACAGTTTCTAGGTAAATACTTATTAACTTATTCAGA
AATGGGATATGGTTTACCTCAAATTTTAGAAAAACTAAAATGCTTTAAGCCTCAATTAATTAAGTTTGTGCTACAAGGTG
AAAAGAGAGGGAAGCTTGAAGTAGAACTAAAGTTATATTCGCAAATATTAGTAAAACAAATAGAAGATAAAGCGATAAAA
CAGACTCAGTTTTTACAGCCTATTTTATTTTTGATTTTAGGTTTATTTATTGTCGCAATTTATTTAGTAATTATGTTACC
AATGTTTCAAATGATGCAAAGTATAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Staphylococcus aureus MW2 |
99.719 |
100 |
0.997 |
| comGB | Staphylococcus aureus N315 |
99.719 |
100 |
0.997 |