Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   ELZ47_RS12085 Genome accession   NZ_LR134002
Coordinates   203602..204390 (+) Length   262 a.a.
NCBI ID   WP_420031188.1    Uniprot ID   -
Organism   Streptococcus sanguinis strain NCTC 10904     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 198602..209390
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ47_RS01065 (NCTC10904_00209) galU 198808..199713 (-) 906 WP_164549535.1 UTP--glucose-1-phosphate uridylyltransferase GalU -
  ELZ47_RS01070 (NCTC10904_00210) - 199730..200752 (-) 1023 WP_126435009.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase -
  ELZ47_RS01075 (NCTC10904_00211) - 200913..202619 (+) 1707 WP_164549536.1 ABC transporter ATP-binding protein -
  ELZ47_RS12075 - 202621..202759 (+) 139 Protein_187 ABC transporter ATP-binding protein -
  ELZ47_RS12080 - 202735..203466 (+) 732 Protein_188 ABC transporter ATP-binding protein -
  ELZ47_RS12085 rcrQ 203602..204390 (+) 789 WP_420031188.1 ABC transporter ATP-binding protein Regulator
  ELZ47_RS01085 (NCTC10904_00213) - 204571..205260 (+) 690 WP_002907876.1 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein -
  ELZ47_RS01090 (NCTC10904_00214) - 205478..205921 (+) 444 WP_126435012.1 dUTP diphosphatase -
  ELZ47_RS01095 (NCTC10904_00215) - 205923..206438 (+) 516 WP_126435013.1 histidine phosphatase family protein -
  ELZ47_RS01100 (NCTC10904_00216) radA 206451..207812 (+) 1362 WP_126435014.1 DNA repair protein RadA Machinery gene
  ELZ47_RS01105 (NCTC10904_00217) - 207927..208643 (+) 717 WP_126435015.1 TIGR00266 family protein -

Sequence

Protein


Download         Length: 262 a.a.        Molecular weight: 29198.86 Da        Isoelectric Point: 4.4090

>NTDB_id=1117853 ELZ47_RS12085 WP_420031188.1 203602..204390(+) (rcrQ) [Streptococcus sanguinis strain NCTC 10904]
MFDAPEEVRPENAPAFTELTDSVEIKHVDFSYVEGKPILKDVSILAPKGKMTAVVGPTGSGKTTIMNLLNRFYDVDNGSI
EFDGRDIRDYELDSLRSHVGIVLQDSVLFSGTIRDNIRFGVPDASQEMVETAARATHIHDYIESLPEKYDTLVDDDQNIF
STGQKQLISIARTLLTDPQVLILDEATSNVDTVTESKIQQAMEAVVAGRTSFVIAHRLKTILNADQIIVLKDGEVIEQGD
HHQLLKLGGFYSELYHNQFVFE

Nucleotide


Download         Length: 789 bp        

>NTDB_id=1117853 ELZ47_RS12085 WP_420031188.1 203602..204390(+) (rcrQ) [Streptococcus sanguinis strain NCTC 10904]
ATGTTTGATGCACCAGAGGAAGTCCGGCCAGAGAATGCACCTGCTTTCACAGAGCTTACAGACTCCGTGGAGATCAAGCA
TGTGGACTTCTCTTATGTAGAAGGCAAGCCTATTCTCAAAGACGTATCTATTTTAGCTCCTAAGGGCAAGATGACAGCTG
TTGTTGGCCCTACTGGATCAGGTAAGACGACCATTATGAACCTGCTCAATCGCTTTTATGATGTGGATAATGGCAGCATT
GAGTTTGACGGTCGCGATATTCGGGACTATGAGCTGGATAGCTTACGGAGTCATGTGGGCATTGTCCTGCAGGATTCGGT
GCTCTTTAGTGGCACGATTCGGGACAATATCCGCTTCGGTGTGCCGGATGCCAGTCAGGAAATGGTCGAAACGGCTGCGC
GTGCGACTCATATTCATGACTATATCGAAAGTCTGCCGGAAAAATATGATACCCTGGTAGATGATGACCAGAATATTTTC
TCAACTGGGCAGAAACAGCTGATTTCCATTGCTAGAACTCTGCTGACGGATCCGCAAGTCTTGATTTTGGACGAAGCGAC
TTCCAATGTCGATACGGTAACAGAAAGCAAGATTCAGCAGGCTATGGAAGCCGTTGTAGCTGGCCGGACTAGCTTTGTTA
TTGCTCACCGCCTCAAAACTATCCTAAATGCTGACCAGATTATCGTCCTCAAAGATGGAGAGGTCATTGAACAGGGCGAT
CATCACCAGCTCCTCAAACTCGGCGGTTTCTACTCAGAACTTTATCATAACCAGTTTGTGTTTGAGTAG

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(39-188)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

48.649

98.855

0.481

Multiple sequence alignment