Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   ELZ47_RS09465 Genome accession   NZ_LR134002
Coordinates   1892111..1893877 (-) Length   588 a.a.
NCBI ID   WP_125331246.1    Uniprot ID   A0AAJ5TBG2
Organism   Streptococcus sanguinis strain NCTC 10904     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1887111..1898877
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ47_RS09450 (NCTC10904_01851) cbiB 1887757..1888707 (-) 951 WP_126435894.1 adenosylcobinamide-phosphate synthase CbiB -
  ELZ47_RS09455 (NCTC10904_01852) - 1888709..1890067 (-) 1359 WP_126435895.1 cobyrinate a,c-diamide synthase -
  ELZ47_RS09460 (NCTC10904_01853) rcrQ 1890364..1892121 (-) 1758 WP_126435896.1 ABC transporter ATP-binding protein Regulator
  ELZ47_RS09465 (NCTC10904_01854) rcrP 1892111..1893877 (-) 1767 WP_125331246.1 ABC transporter ATP-binding protein Regulator
  ELZ47_RS09470 (NCTC10904_01855) - 1893870..1894328 (-) 459 WP_125331247.1 MarR family winged helix-turn-helix transcriptional regulator -
  ELZ47_RS09475 (NCTC10904_01856) - 1894482..1894892 (-) 411 WP_125331248.1 peptide deformylase -
  ELZ47_RS09480 (NCTC10904_01857) scrK 1894939..1895838 (-) 900 WP_125331249.1 fructokinase ScrK -
  ELZ47_RS09485 (NCTC10904_01858) - 1895998..1898010 (-) 2013 WP_125331250.1 sucrose-specific PTS transporter subunit IIBC -

Sequence

Protein


Download         Length: 588 a.a.        Molecular weight: 65087.46 Da        Isoelectric Point: 5.3029

>NTDB_id=1117834 ELZ47_RS09465 WP_125331246.1 1892111..1893877(-) (rcrP) [Streptococcus sanguinis strain NCTC 10904]
MFKLFKRLTAREVSMIVLSVLFTFLTVYLELEVPTYISTITELLQTPGTGLADLWEPGLKMIGLSFASLLSAIVVGFFAA
RIAASFTQSLRSDIFNRVLDYSQTEIKKFSIPSLLTRTTNDITQVQTLITMGLQVVTRGPIMAIWAMTKIIGKSENWLTA
VLIAVIVNILLTVVLVTLAFPKQSVAQRLVDKLNSVTRESLTGIRVVRAYNAEDYQDEKFAAANDEVTRLNLFIGRLMAM
MNPVMMGISSGLTLAIYWIGAYLIQEAGLQERLPLFSDMVVFMSYAMQIVIGFLLMGALFIVLPRTIVSAGRINEVLDLH
SSITSPEQPKAAADSKGEVVFRDVSFRYSKNSEAVIEHVSFTAQAGDTVAFIGSTGSGKSTLVNLIPRFYDVTEGEILVD
GVNVQDYQLEDLHNKVGYIPQKAVLFSGDIESNLDLGQSKESPLDEQKMWEALDLAQAKPFVQEKEKGLKAEVAQSGTNF
SGGQRQRLAIARALARKPEILIFDDSFSALDYKTDRILRKGLAERTRDMTKLIVAQRISTIMDADQILVLDAGKVVGQGT
HRELLASNEVYQEIAYSQLSKEELENGK

Nucleotide


Download         Length: 1767 bp        

>NTDB_id=1117834 ELZ47_RS09465 WP_125331246.1 1892111..1893877(-) (rcrP) [Streptococcus sanguinis strain NCTC 10904]
ATGTTTAAGTTATTTAAACGGCTGACGGCAAGGGAAGTGAGCATGATTGTTCTCAGTGTGCTCTTTACCTTCCTAACGGT
ATATTTGGAATTAGAAGTTCCAACCTATATTTCGACGATTACAGAGCTATTGCAAACACCGGGGACAGGCTTGGCGGATC
TGTGGGAGCCAGGTTTGAAAATGATTGGCCTATCTTTTGCTAGCTTGCTGTCAGCTATTGTGGTTGGCTTTTTTGCCGCT
CGTATAGCAGCCAGCTTTACCCAAAGCTTGCGGAGCGATATTTTCAACCGTGTGCTAGACTATTCACAGACGGAGATTAA
GAAATTTTCAATCCCTAGTCTGCTGACTCGGACGACGAATGACATTACCCAGGTACAGACCTTAATTACCATGGGGCTTC
AGGTAGTGACCAGGGGACCGATTATGGCGATTTGGGCCATGACCAAGATTATTGGCAAGTCCGAGAACTGGCTAACTGCA
GTTCTTATTGCTGTTATAGTCAATATCCTGCTGACAGTAGTTTTGGTGACATTGGCCTTTCCCAAGCAGTCAGTGGCGCA
GCGCTTGGTCGATAAGCTAAACAGCGTCACTAGAGAGAGTCTGACTGGGATTCGCGTGGTCCGGGCTTACAATGCTGAGG
ACTATCAGGATGAGAAGTTTGCGGCGGCCAATGATGAAGTAACCCGACTCAATCTTTTCATCGGTCGTCTGATGGCTATG
ATGAATCCAGTTATGATGGGGATTTCCAGCGGCTTGACACTGGCGATTTACTGGATTGGTGCTTATTTGATCCAGGAGGC
TGGGCTGCAGGAGCGTCTCCCGCTCTTCAGTGATATGGTCGTCTTTATGTCCTATGCTATGCAGATTGTGATTGGATTCT
TGCTCATGGGTGCCCTCTTCATCGTCCTGCCTCGGACCATTGTATCCGCTGGCCGGATTAATGAAGTTCTGGACCTGCAT
TCTTCTATCACCAGTCCGGAACAGCCTAAGGCAGCAGCGGATAGCAAGGGAGAGGTGGTCTTTCGAGACGTGTCCTTCCG
CTATTCCAAGAATTCAGAAGCGGTCATTGAGCATGTCAGCTTTACAGCGCAGGCTGGTGATACCGTGGCCTTTATCGGTT
CAACTGGTTCAGGGAAATCCACGCTAGTCAATCTCATTCCTCGTTTCTACGATGTAACTGAAGGAGAGATTCTGGTAGAT
GGTGTCAATGTTCAGGATTACCAGCTGGAAGACCTGCATAATAAGGTCGGCTACATCCCGCAAAAGGCGGTGCTTTTCTC
TGGCGATATCGAGAGCAATCTGGACTTGGGTCAAAGCAAAGAAAGCCCGCTGGATGAGCAGAAAATGTGGGAGGCTCTTG
ACCTAGCACAGGCTAAGCCCTTTGTCCAAGAGAAGGAAAAGGGGCTGAAAGCTGAAGTGGCTCAAAGCGGAACCAACTTC
TCTGGTGGCCAGCGTCAGCGTTTGGCCATTGCCAGAGCTTTGGCTCGTAAGCCAGAAATCCTCATCTTTGACGACTCCTT
CTCAGCGCTGGACTATAAGACAGACCGCATTTTGCGCAAGGGACTGGCTGAGCGGACGCGGGATATGACCAAGCTGATTG
TGGCGCAGCGGATTTCTACTATCATGGATGCGGATCAAATCTTGGTCTTGGATGCTGGTAAGGTGGTTGGTCAAGGTACT
CACAGAGAGCTTTTGGCCAGCAACGAAGTCTATCAAGAAATTGCCTACTCACAATTATCCAAGGAGGAATTAGAAAATGG
AAAATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(19-290)

ABC transporter (ABC_tran)

(357-506)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

68.333

100

0.697

Multiple sequence alignment