Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   ELZ47_RS09460 Genome accession   NZ_LR134002
Coordinates   1890364..1892121 (-) Length   585 a.a.
NCBI ID   WP_126435896.1    Uniprot ID   A0AAJ5TAM5
Organism   Streptococcus sanguinis strain NCTC 10904     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1885364..1897121
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ47_RS09440 (NCTC10904_01849) - 1886344..1887048 (-) 705 WP_126435892.1 cobalt-precorrin-8 methylmutase -
  ELZ47_RS09445 (NCTC10904_01850) - 1887049..1887747 (-) 699 WP_126435893.1 cobalt-precorrin-8 methylmutase -
  ELZ47_RS09450 (NCTC10904_01851) cbiB 1887757..1888707 (-) 951 WP_126435894.1 adenosylcobinamide-phosphate synthase CbiB -
  ELZ47_RS09455 (NCTC10904_01852) - 1888709..1890067 (-) 1359 WP_126435895.1 cobyrinate a,c-diamide synthase -
  ELZ47_RS09460 (NCTC10904_01853) rcrQ 1890364..1892121 (-) 1758 WP_126435896.1 ABC transporter ATP-binding protein Regulator
  ELZ47_RS09465 (NCTC10904_01854) rcrP 1892111..1893877 (-) 1767 WP_125331246.1 ABC transporter ATP-binding protein Regulator
  ELZ47_RS09470 (NCTC10904_01855) - 1893870..1894328 (-) 459 WP_125331247.1 MarR family winged helix-turn-helix transcriptional regulator -
  ELZ47_RS09475 (NCTC10904_01856) - 1894482..1894892 (-) 411 WP_125331248.1 peptide deformylase -
  ELZ47_RS09480 (NCTC10904_01857) scrK 1894939..1895838 (-) 900 WP_125331249.1 fructokinase ScrK -

Sequence

Protein


Download         Length: 585 a.a.        Molecular weight: 64539.49 Da        Isoelectric Point: 5.0990

>NTDB_id=1117833 ELZ47_RS09460 WP_126435896.1 1890364..1892121(-) (rcrQ) [Streptococcus sanguinis strain NCTC 10904]
MENKKPSLFSQIRPYLKGFQLPLALAFVGAVLSNIITVYGPNKLKEITNLISEGLATNIDLKAVSEIALLLTVLYAVGAL
LNYGQSFIISTVIQYFSKRLRKAIAEKINKLPLGYFDGHSQGDTLSRVTNDVDTVGQSLNQSLGNVISASLLLVAVVLTM
FFMNWILALVTILATVVGFVFVGFIMGKSQGYFTAQQNDLAAVNGYVEEMYSGHNVVTSYNAIDQSKERFAVLNHNLYNS
IWKSQFISSMMMPLMFFTGNFAYVLVILVGAALAINGSISIGIIVAFMVYVRTFSQPLSQIAQGIAVLQQAGAALVRVFE
FLAEPDMEDDQHKEQQLTAVKGNVAFEEVFFGYKPDQTIIHDFSAQAKAGQKIAIVGPTGAGKTTIVNLLMKFYEIDKGR
ISIDGIDIKDMKRSEVHDAFSMVLQDTWLFEGTIRENLIYNQEHVTDEAVVAAAKAVGVHHFIMTLPQAYNTVLDDTVNL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIRNADLILVMRDGNIIEQGN
HDELMDQNGFYADLYNSQFVEEDAG

Nucleotide


Download         Length: 1758 bp        

>NTDB_id=1117833 ELZ47_RS09460 WP_126435896.1 1890364..1892121(-) (rcrQ) [Streptococcus sanguinis strain NCTC 10904]
ATGGAAAATAAGAAGCCTTCATTATTTAGCCAGATACGGCCTTATCTCAAAGGCTTCCAGCTTCCTCTTGCTTTGGCATT
TGTGGGAGCTGTCTTGTCAAATATTATCACGGTCTATGGGCCAAATAAACTAAAAGAAATTACCAATCTCATCTCTGAAG
GTTTGGCTACCAATATTGATTTAAAAGCTGTGTCTGAGATTGCCCTTCTGCTGACCGTGCTCTATGCAGTCGGAGCTCTG
CTCAACTACGGGCAGTCCTTTATCATCAGTACGGTTATCCAGTATTTCTCCAAGCGGCTGCGGAAGGCCATTGCAGAGAA
GATTAACAAGCTGCCGCTGGGCTATTTCGATGGTCATTCTCAGGGGGATACTCTGTCGCGCGTGACTAATGACGTAGATA
CGGTCGGCCAATCCCTCAACCAGAGTCTGGGGAATGTTATCTCTGCCAGCCTGCTCTTGGTGGCTGTGGTTTTGACCATG
TTCTTCATGAACTGGATCTTGGCCTTGGTAACCATCTTGGCTACTGTAGTCGGCTTTGTCTTTGTCGGCTTCATCATGGG
CAAGTCTCAGGGCTATTTCACCGCCCAGCAAAACGATCTGGCTGCAGTAAACGGTTATGTGGAGGAGATGTACTCCGGTC
ATAATGTTGTTACCAGCTATAATGCCATTGATCAGTCTAAGGAGCGCTTTGCAGTTCTCAATCATAATCTCTATAACAGT
ATTTGGAAGTCTCAATTTATTTCTAGCATGATGATGCCGCTCATGTTCTTTACGGGGAATTTTGCCTATGTGCTGGTTAT
TTTGGTCGGTGCTGCTCTGGCCATTAATGGCTCTATTAGCATCGGAATTATCGTCGCCTTTATGGTTTATGTGCGGACCT
TCTCTCAGCCTTTGTCACAGATTGCCCAAGGTATCGCCGTCTTGCAGCAGGCTGGTGCTGCACTGGTTCGTGTCTTTGAA
TTTCTAGCTGAGCCTGATATGGAAGACGACCAGCATAAAGAGCAGCAGCTTACTGCTGTCAAGGGAAATGTTGCCTTTGA
AGAAGTCTTCTTTGGCTACAAGCCGGACCAGACCATCATCCATGATTTCTCAGCCCAGGCCAAAGCCGGACAGAAGATTG
CTATTGTCGGTCCGACGGGTGCCGGTAAGACGACTATCGTTAATCTCCTTATGAAGTTCTATGAAATTGACAAGGGACGT
ATCAGCATTGATGGTATAGATATTAAGGATATGAAACGCTCCGAGGTTCACGATGCCTTTTCAATGGTCTTGCAGGATAC
CTGGCTCTTTGAGGGAACTATCCGAGAGAACTTGATTTATAATCAGGAGCATGTGACGGATGAAGCAGTTGTTGCTGCAG
CGAAGGCGGTCGGTGTTCATCACTTTATCATGACGCTGCCGCAAGCCTACAATACGGTGCTGGATGATACAGTCAACCTG
TCGGTCGGTCAGAAGCAGCTGCTTACCATCGCTCGTGCTCTGCTGAAAGATGCGCCGCTCTTGATCTTGGATGAGGCCAC
TTCGTCAGTCGATACGCGGACGGAGGAGCTGATTCAAAAGGCGATGGACAAACTCATGGAAGGCCGGACTTCCTTTGTCA
TTGCCCACCGCCTGTCCACTATCCGAAATGCAGATCTTATCTTGGTCATGCGTGATGGAAATATCATCGAGCAGGGCAAC
CACGATGAACTCATGGATCAGAATGGCTTCTATGCGGACCTCTATAATAGTCAATTTGTAGAGGAAGATGCAGGTTGA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(24-298)

ABC transporter (ABC_tran)

(361-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

69.521

99.829

0.694

Multiple sequence alignment