Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   ELZ47_RS08645 Genome accession   NZ_LR134002
Coordinates   1736153..1737196 (-) Length   347 a.a.
NCBI ID   WP_126435812.1    Uniprot ID   A0AAJ5NIC3
Organism   Streptococcus sanguinis strain NCTC 10904     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1731153..1742196
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ47_RS08625 trpB 1732228..1733409 (-) 1182 WP_125330625.1 tryptophan synthase subunit beta -
  ELZ47_RS08630 (NCTC10904_01690) - 1733778..1734317 (-) 540 WP_118105324.1 VanZ family protein -
  ELZ47_RS08635 (NCTC10904_01691) rlmN 1734304..1735392 (-) 1089 WP_002911938.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  ELZ47_RS08640 (NCTC10904_01692) - 1735402..1735971 (-) 570 WP_126435811.1 YutD family protein -
  ELZ47_RS08645 (NCTC10904_01693) sepM 1736153..1737196 (-) 1044 WP_126435812.1 SepM family pheromone-processing serine protease Regulator
  ELZ47_RS08650 (NCTC10904_01694) coaD 1737183..1737677 (-) 495 WP_126435813.1 pantetheine-phosphate adenylyltransferase -
  ELZ47_RS08655 (NCTC10904_01695) rsmD 1737667..1738215 (-) 549 WP_164549598.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  ELZ47_RS08660 (NCTC10904_01696) - 1738286..1738774 (-) 489 WP_126435814.1 YcxB family protein -
  ELZ47_RS08665 (NCTC10904_01697) - 1738916..1739593 (+) 678 WP_126435815.1 helix-turn-helix domain-containing protein -
  ELZ47_RS08670 (NCTC10904_01698) - 1739597..1741012 (+) 1416 WP_126435816.1 Y-family DNA polymerase -
  ELZ47_RS08675 (NCTC10904_01699) - 1741009..1741377 (+) 369 WP_126435817.1 hypothetical protein -
  ELZ47_RS08680 (NCTC10904_01700) - 1741361..1741654 (+) 294 WP_126435818.1 DUF5960 family protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 37957.13 Da        Isoelectric Point: 4.9159

>NTDB_id=1117830 ELZ47_RS08645 WP_126435812.1 1736153..1737196(-) (sepM) [Streptococcus sanguinis strain NCTC 10904]
MKRIKKFILPTVIGVTIAFFIAALWVRLPYYIEVPGGAEDVRQVLLVDNQADKEAGSYNFVTVGVEQATFAHLVYAWLTP
FTDIYSAKDMTGGSTDDEFNRINQFYMETSQNMAKYQGLTTAGKEIKMDYLGVYVLQVADNSTFKGVLNIADTVTGVNDK
TFESSEELVKYVNSQKLGDKVKVTFQEDGQEKSATGKIIKLENGKNGIGISLIDRTEVSSNIPITFSTEGIGGPSAGLMF
SLAIYTQLADPTLRDGRDIAGTGSISREGEVGEIGGIDKKVVSAAQSGADVFFAPNNELTEEEKKLSLNGKNNYQTALET
AKKIKTDMKIVPVKTLQDAIDYLKKNK

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=1117830 ELZ47_RS08645 WP_126435812.1 1736153..1737196(-) (sepM) [Streptococcus sanguinis strain NCTC 10904]
ATGAAAAGAATTAAGAAGTTTATATTGCCGACGGTCATTGGCGTCACTATTGCCTTTTTTATAGCAGCTCTTTGGGTTCG
TCTGCCTTATTATATAGAAGTTCCTGGTGGTGCCGAGGATGTTCGTCAGGTCTTGCTGGTTGATAATCAGGCTGACAAGG
AAGCGGGTTCCTACAACTTTGTGACGGTCGGAGTAGAGCAGGCAACCTTTGCTCATCTGGTCTATGCTTGGCTGACCCCT
TTTACAGATATTTATTCTGCCAAGGATATGACGGGTGGCTCCACGGACGATGAGTTTAATCGGATCAACCAGTTTTACAT
GGAAACATCGCAAAATATGGCCAAATATCAAGGGTTGACGACGGCTGGTAAAGAGATCAAAATGGACTATTTGGGGGTTT
ATGTCCTGCAGGTAGCTGATAACTCAACCTTCAAAGGAGTTCTCAATATTGCTGATACAGTAACTGGTGTCAATGACAAG
ACATTTGAAAGCTCTGAAGAGCTGGTCAAGTATGTCAACTCGCAGAAGCTTGGGGATAAGGTCAAGGTGACTTTCCAAGA
GGATGGTCAGGAGAAATCAGCAACCGGAAAGATTATCAAGCTAGAGAACGGTAAGAACGGGATTGGGATTAGTCTGATAG
ACCGGACGGAAGTCAGCAGTAATATTCCAATTACATTTTCAACTGAGGGTATCGGCGGTCCTAGTGCTGGTCTCATGTTT
AGCTTAGCCATTTATACTCAGTTGGCTGATCCGACTCTTCGTGATGGCCGCGATATTGCAGGGACTGGCAGCATCAGCCG
TGAAGGTGAAGTTGGCGAAATCGGCGGAATCGATAAGAAAGTCGTTTCAGCAGCCCAAAGCGGAGCAGATGTTTTCTTTG
CACCCAACAATGAACTTACAGAGGAAGAGAAGAAGCTTTCTCTCAATGGGAAAAACAACTACCAAACGGCTCTGGAGACA
GCCAAGAAGATTAAAACGGATATGAAAATTGTTCCGGTTAAAACGCTGCAGGATGCCATTGACTATCTGAAAAAGAACAA
GTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

56.936

99.712

0.568


Multiple sequence alignment