Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   ELZ47_RS03125 Genome accession   NZ_LR134002
Coordinates   615295..616008 (-) Length   237 a.a.
NCBI ID   WP_164549628.1    Uniprot ID   A0AAJ5NH58
Organism   Streptococcus sanguinis strain NCTC 10904     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 610295..621008
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ47_RS03095 (NCTC10904_00612) - 610739..611347 (+) 609 WP_164549542.1 hypothetical protein -
  ELZ47_RS03100 (NCTC10904_00613) - 611476..611997 (+) 522 WP_232011366.1 hypothetical protein -
  ELZ47_RS03105 (NCTC10904_00614) - 612118..612726 (+) 609 WP_125331142.1 hypothetical protein -
  ELZ47_RS03110 (NCTC10904_00615) - 612717..614228 (+) 1512 WP_125331143.1 hypothetical protein -
  ELZ47_RS03115 (NCTC10904_00616) - 614237..614530 (+) 294 WP_002914579.1 hypothetical protein -
  ELZ47_RS03120 (NCTC10904_00617) - 614539..614880 (+) 342 WP_232011367.1 hypothetical protein -
  ELZ47_RS03125 (NCTC10904_00618) treR 615295..616008 (-) 714 WP_164549628.1 trehalose operon repressor Regulator
  ELZ47_RS03130 (NCTC10904_00619) treP 616197..618194 (+) 1998 WP_125331146.1 PTS system trehalose-specific EIIBC component -
  ELZ47_RS03135 (NCTC10904_00620) treC 618266..619897 (+) 1632 WP_164549543.1 alpha,alpha-phosphotrehalase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27840.76 Da        Isoelectric Point: 7.3926

>NTDB_id=1117810 ELZ47_RS03125 WP_164549628.1 615295..616008(-) (treR) [Streptococcus sanguinis strain NCTC 10904]
MKKYKQLFKQIEKDILEERYAVGDFLPSEHQLTEDYQVSRDTVRKALALLQEEGLIEKVRGQGSKVIKHEQFDFPVSKLT
SYQEVVKQNNMQSKTNVVSLEKITVDQKLSDITGFPPYRLVWRIVRQRVVDQIASVLDIDYLDKDIVPDLTREIGEQSIY
AYLENDLKLNIAYAKKEFTIDHANDRDKILMDLGKDQQVVSVKSQVYLADGRQFQYTESRHKLDKFRFVDFAKRQKE

Nucleotide


Download         Length: 714 bp        

>NTDB_id=1117810 ELZ47_RS03125 WP_164549628.1 615295..616008(-) (treR) [Streptococcus sanguinis strain NCTC 10904]
ATGAAGAAATACAAACAATTGTTCAAACAGATTGAGAAAGATATTTTAGAGGAACGTTATGCAGTCGGAGACTTCTTGCC
CAGCGAACATCAGCTGACAGAAGACTACCAGGTTAGCCGCGATACAGTCCGCAAGGCTCTGGCGCTGCTGCAGGAAGAAG
GATTGATTGAAAAAGTCCGCGGACAGGGTTCCAAAGTCATCAAGCATGAACAGTTTGACTTTCCTGTGTCTAAACTGACC
AGCTATCAAGAAGTAGTCAAGCAGAATAATATGCAGTCCAAAACCAATGTTGTCAGCTTGGAAAAGATTACCGTAGATCA
GAAACTATCCGACATCACTGGCTTCCCTCCCTACCGACTGGTTTGGCGAATCGTCCGTCAGCGCGTTGTAGACCAAATCG
CCTCTGTCTTAGATATTGACTATTTAGACAAGGACATCGTCCCTGACTTGACAAGGGAAATCGGTGAGCAGTCCATTTAT
GCCTATTTGGAAAATGACTTAAAGCTCAACATCGCCTATGCCAAAAAGGAATTTACCATCGACCACGCCAATGACCGAGA
CAAGATCCTCATGGACCTAGGCAAGGACCAGCAGGTCGTCTCTGTCAAGTCTCAGGTCTATCTGGCAGACGGCCGCCAGT
TTCAATATACAGAGAGCCGGCACAAGCTCGACAAATTTCGCTTTGTGGATTTTGCTAAGCGCCAGAAAGAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(90-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

59.494

100

0.595

Multiple sequence alignment