Detailed information NTG1117720

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ELZ66_RS13575
• Genome accession: NZ_LR133933
• Coordinates: 2987177..2988244 (-)
• Length: 355 a.a.
• NCBI ID: WP_015443981.1
• Uniprot ID: -
• Organism: Legionella pneumophila strain NCTC12180
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2982177..2993244

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ELZ66_RS13550 (NCTC12180_02701)	-	2982468..2983184 (-)	717	WP_010948365.1	dienelactone hydrolase family protein	-
ELZ66_RS13555 (NCTC12180_02702)	-	2983466..2984332 (+)	867	WP_015443982.1	alpha/beta hydrolase	-
ELZ66_RS13560 (NCTC12180_02703)	rpoH	2984466..2985320 (-)	855	WP_013101924.1	RNA polymerase sigma factor RpoH	-
ELZ66_RS13565 (NCTC12180_02704)	ftsX	2985617..2986546 (-)	930	WP_010948368.1	permease-like cell division protein FtsX	-
ELZ66_RS13570 (NCTC12180_02705)	ftsE	2986540..2987190 (-)	651	WP_011216539.1	cell division ATP-binding protein FtsE	-
ELZ66_RS13575 (NCTC12180_02706)	pilA	2987177..2988244 (-)	1068	WP_015443981.1	signal recognition particle-docking protein FtsY	Machinery gene
ELZ66_RS13580 (NCTC12180_02707)	-	2988307..2989632 (+)	1326	WP_010948371.1	pitrilysin family protein	-
ELZ66_RS13585 (NCTC12180_02708)	-	2989629..2990933 (+)	1305	WP_010948372.1	pitrilysin family protein	-
ELZ66_RS13590 (NCTC12180_02709)	rsmD	2990930..2991475 (+)	546	WP_010948373.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ELZ66_RS13595 (NCTC12180_02710)	dotD	2991550..2992041 (+)	492	WP_010948374.1	type IVB secretion system lipoprotein DotD	-
ELZ66_RS13600 (NCTC12180_02711)	dotC	2992022..2992933 (+)	912	WP_010948375.1	type IVB secretion system protein DotC	-

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 38999.64 Da
• Isoelectric Point: 6.1205

>NTDB_id=1117720 ELZ66_RS13575 WP_015443981.1 2987177..2988244(-) (pilA) [Legionella pneumophila strain NCTC12180]
MIKWFKRNQNSEPNLDAEEQQDHAKSSMESRLEEPQELTVKEPSPKESIFARFRKGLSKTRHQLGEGISRLLLGKKEISQ
ELLEELETLLISADLGLDTTQDVLKQLNEGLARKQLSNGEAVYLTLKTNLQTILSQEEKPLSIETEDGSPFVILMVGVNG
AGKTTTIGKLAKQFQKQGKKVMLAAGDTFRAAAVEQLHVWGERNGIPVIAQHTGADSASVIFDALQAAKARKIDVLIADT
AGRLHTQSNLMEELKKVKRVMQKLDPKAPHETMLVLDASIGQNALAQAKQFHEAVQLTGITMTKLDGTAKGGILFAIAND
LGIPFRYLGVGEGIEDLRPFDAAQFVSAIFDDDHI

Nucleotide

• Length: 1068 bp

>NTDB_id=1117720 ELZ66_RS13575 WP_015443981.1 2987177..2988244(-) (pilA) [Legionella pneumophila strain NCTC12180]
ATGATTAAATGGTTTAAACGAAATCAAAATTCCGAACCAAATTTGGATGCCGAAGAGCAACAAGATCATGCCAAAAGCAG
CATGGAATCCAGGCTTGAAGAACCCCAGGAACTGACTGTCAAAGAGCCTTCGCCCAAAGAAAGTATTTTTGCCCGGTTTA
GGAAAGGCCTTAGCAAAACCCGTCATCAATTGGGGGAAGGCATAAGTCGGCTGCTGTTAGGTAAAAAAGAAATCAGCCAG
GAGTTACTCGAAGAGCTAGAGACCTTATTAATTAGTGCTGATTTAGGTTTGGACACCACTCAAGACGTATTGAAACAGCT
AAATGAAGGCTTGGCACGAAAGCAACTGTCTAATGGTGAAGCAGTTTATCTGACTCTAAAGACAAATTTGCAAACTATTT
TGAGCCAGGAAGAGAAACCGCTTTCCATAGAAACTGAAGACGGCTCTCCCTTTGTCATATTAATGGTTGGTGTCAATGGA
GCCGGTAAAACAACCACGATTGGTAAACTAGCCAAACAATTCCAAAAGCAGGGAAAAAAAGTCATGTTAGCTGCGGGCGA
TACGTTTCGGGCGGCTGCGGTGGAACAATTGCATGTATGGGGCGAAAGAAATGGCATACCTGTTATTGCCCAGCATACCG
GCGCTGACAGTGCCTCAGTAATATTTGATGCTCTTCAGGCTGCCAAAGCGAGAAAAATAGATGTTTTAATCGCTGATACA
GCCGGGCGTTTGCATACTCAAAGCAATTTAATGGAAGAGTTGAAAAAAGTGAAAAGAGTCATGCAGAAACTCGATCCCAA
GGCACCTCATGAAACCATGTTGGTATTGGATGCGAGTATTGGGCAGAACGCCTTGGCTCAGGCAAAGCAGTTTCATGAAG
CAGTACAATTAACTGGAATTACTATGACCAAGCTTGATGGGACAGCCAAAGGCGGGATATTATTTGCTATAGCGAATGAT
TTGGGGATACCTTTTCGTTATTTAGGGGTAGGGGAGGGCATTGAAGATTTGAGGCCCTTTGACGCAGCGCAATTTGTTAG
TGCGATATTCGATGATGATCACATTTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (64-129)

• SRP54-type protein, GTPase domain (SRP54) (150-350)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	52.353	95.775	0.501