Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   EW042_RS17320 Genome accession   NZ_LR130548
Coordinates   3419926..3420522 (-) Length   198 a.a.
NCBI ID   WP_004150836.1    Uniprot ID   A0A0H3GL50
Organism   Klebsiella pneumoniae strain KPC2 isolate KPC2     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3414926..3425522
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EW042_RS17305 helD 3415134..3417188 (-) 2055 WP_002898429.1 DNA helicase IV -
  EW042_RS17310 - 3417313..3417759 (+) 447 WP_002898425.1 YccF domain-containing protein -
  EW042_RS17315 yccS 3417777..3419912 (+) 2136 WP_002898422.1 YccS family putative transporter -
  EW042_RS17320 sxy/tfoX 3419926..3420522 (-) 597 WP_004150836.1 TfoX/Sxy family DNA transformation protein Regulator
  EW042_RS17330 sulA 3420871..3421380 (+) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  EW042_RS17335 ompA 3421733..3422803 (+) 1071 WP_002898408.1 porin OmpA -
  EW042_RS17340 matP 3422935..3423387 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  EW042_RS17345 - 3423573..3425330 (+) 1758 WP_002898401.1 Lon protease family protein -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22576.15 Da        Isoelectric Point: 10.1298

>NTDB_id=1117444 EW042_RS17320 WP_004150836.1 3419926..3420522(-) (sxy/tfoX) [Klebsiella pneumoniae strain KPC2 isolate KPC2]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNYRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1117444 EW042_RS17320 WP_004150836.1 3419926..3420522(-) (sxy/tfoX) [Klebsiella pneumoniae strain KPC2 isolate KPC2]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTACCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3GL50

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51

Multiple sequence alignment