Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   EW022_RS02200 Genome accession   NZ_LR130240
Coordinates   420167..420892 (+) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain PS006 isolate PS006     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 415167..425892
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EW022_RS02170 - 415346..416806 (+) 1461 WP_002988645.1 NCS2 family permease -
  EW022_RS02175 tsaE 416960..417421 (+) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  EW022_RS02180 - 417396..417920 (+) 525 WP_011285082.1 GNAT family N-acetyltransferase -
  EW022_RS02185 brpA 417929..419212 (+) 1284 WP_002983372.1 biofilm formation/cell division transcriptional regulator BrpA -
  EW022_RS02190 - 419323..419679 (-) 357 WP_002988657.1 hypothetical protein -
  EW022_RS02195 - 419676..420095 (-) 420 WP_011285081.1 HIT family protein -
  EW022_RS02200 pptA 420167..420892 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  EW022_RS02205 - 420895..421929 (+) 1035 WP_011285080.1 ABC transporter permease -
  EW022_RS02210 ccrZ 421993..422784 (+) 792 WP_002983385.1 cell cycle regulator CcrZ -
  EW022_RS02215 trmB 422784..423419 (+) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  EW022_RS02225 rimP 423678..424214 (+) 537 WP_002988815.1 ribosome maturation factor RimP -
  EW022_RS02230 nusA 424389..425546 (+) 1158 WP_002983485.1 transcription termination factor NusA -
  EW022_RS02235 rnpM 425562..425858 (+) 297 WP_002983486.1 RNase P modulator RnpM -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=1116726 EW022_RS02200 WP_002983379.1 420167..420892(+) (pptA) [Streptococcus pyogenes strain PS006 isolate PS006]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1116726 EW022_RS02200 WP_002983379.1 420167..420892(+) (pptA) [Streptococcus pyogenes strain PS006 isolate PS006]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGATAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGCTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714

Multiple sequence alignment