Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   EW023_RS07335 Genome accession   NZ_LR130239
Coordinates   1446588..1447313 (-) Length   241 a.a.
NCBI ID   WP_023611908.1    Uniprot ID   A0A5S4TEK9
Organism   Streptococcus pyogenes strain PS003 isolate PS003     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1441588..1452313
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EW023_RS07300 rnpM 1441622..1441918 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  EW023_RS07305 nusA 1441934..1443091 (-) 1158 WP_023611711.1 transcription termination factor NusA -
  EW023_RS07310 rimP 1443266..1443802 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  EW023_RS07320 trmB 1444061..1444696 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  EW023_RS07325 ccrZ 1444696..1445487 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  EW023_RS07330 - 1445551..1446585 (-) 1035 WP_023611934.1 ABC transporter permease -
  EW023_RS07335 pptA 1446588..1447313 (-) 726 WP_023611908.1 ABC transporter ATP-binding protein Regulator
  EW023_RS07340 - 1447385..1447804 (+) 420 WP_023611931.1 HIT family protein -
  EW023_RS07345 - 1447801..1448157 (+) 357 WP_014407784.1 hypothetical protein -
  EW023_RS07350 brpA 1448268..1449551 (-) 1284 WP_023611938.1 biofilm formation/cell division transcriptional regulator BrpA -
  EW023_RS07355 - 1449560..1450084 (-) 525 WP_023611919.1 GNAT family N-acetyltransferase -
  EW023_RS07360 tsaE 1450059..1450520 (-) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  EW023_RS07365 - 1450674..1452134 (-) 1461 WP_023611933.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26704.78 Da        Isoelectric Point: 4.4883

>NTDB_id=1116691 EW023_RS07335 WP_023611908.1 1446588..1447313(-) (pptA) [Streptococcus pyogenes strain PS003 isolate PS003]
MLNIKNLTGGYYNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1116691 EW023_RS07335 WP_023611908.1 1446588..1447313(-) (pptA) [Streptococcus pyogenes strain PS003 isolate PS003]
ATGTTAAACATTAAAAATCTAACAGGAGGATATTACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5S4TEK9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714

Multiple sequence alignment