Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   EW024_RS07235 Genome accession   NZ_LR130237
Coordinates   1407690..1408415 (-) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain SP444 isolate SP444     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1402690..1413415
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EW024_RS07200 rnpM 1402724..1403020 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  EW024_RS07205 nusA 1403036..1404193 (-) 1158 WP_002983485.1 transcription termination factor NusA -
  EW024_RS07210 rimP 1404368..1404904 (-) 537 WP_011528897.1 ribosome maturation factor RimP -
  EW024_RS07220 trmB 1405163..1405798 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  EW024_RS07225 ccrZ 1405798..1406589 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  EW024_RS07230 - 1406653..1407687 (-) 1035 WP_010922583.1 ABC transporter permease -
  EW024_RS07235 pptA 1407690..1408415 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  EW024_RS07240 - 1408487..1408906 (+) 420 WP_002983376.1 HIT family protein -
  EW024_RS07245 - 1408903..1409259 (+) 357 WP_002983373.1 hypothetical protein -
  EW024_RS07250 brpA 1409370..1410653 (-) 1284 WP_002983372.1 biofilm formation/cell division transcriptional regulator BrpA -
  EW024_RS07255 - 1410662..1411186 (-) 525 WP_002994338.1 GNAT family N-acetyltransferase -
  EW024_RS07260 tsaE 1411161..1411622 (-) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  EW024_RS07265 - 1411776..1413236 (-) 1461 WP_011528898.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=1116580 EW024_RS07235 WP_002983379.1 1407690..1408415(-) (pptA) [Streptococcus pyogenes strain SP444 isolate SP444]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1116580 EW024_RS07235 WP_002983379.1 1407690..1408415(-) (pptA) [Streptococcus pyogenes strain SP444 isolate SP444]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714

Multiple sequence alignment