Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   EW021_RS07550 Genome accession   NZ_LR130236
Coordinates   1445788..1446513 (-) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain 5448 isolate 5448     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1440788..1451513
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EW021_RS07515 - 1440922..1441305 (+) 384 WP_002988673.1 ImmA/IrrE family metallo-endopeptidase -
  EW021_RS07520 - 1441316..1441867 (+) 552 WP_002988670.1 hypothetical protein -
  EW021_RS07525 - 1441984..1443063 (+) 1080 WP_002988667.1 site-specific integrase -
  EW021_RS07535 trmB 1443261..1443896 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  EW021_RS07540 ccrZ 1443896..1444687 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  EW021_RS07545 - 1444751..1445785 (-) 1035 WP_010922583.1 ABC transporter permease -
  EW021_RS07550 pptA 1445788..1446513 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  EW021_RS07555 - 1446585..1447004 (+) 420 WP_002983376.1 HIT family protein -
  EW021_RS07560 - 1447001..1447357 (+) 357 WP_002988657.1 hypothetical protein -
  EW021_RS07565 brpA 1447468..1448742 (-) 1275 WP_010922584.1 biofilm formation/cell division transcriptional regulator BrpA -
  EW021_RS07570 - 1448751..1449275 (-) 525 WP_009880752.1 GNAT family N-acetyltransferase -
  EW021_RS07575 tsaE 1449250..1449711 (-) 462 WP_009880751.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  EW021_RS07580 - 1449865..1451325 (-) 1461 WP_011285677.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=1116519 EW021_RS07550 WP_002983379.1 1445788..1446513(-) (pptA) [Streptococcus pyogenes strain 5448 isolate 5448]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1116519 EW021_RS07550 WP_002983379.1 1445788..1446513(-) (pptA) [Streptococcus pyogenes strain 5448 isolate 5448]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714

Multiple sequence alignment