Detailed information NTG1116183

Bioinformatically predicted

Overview

• Name: HI0659
• Type: Machinery gene
• Locus tag: EQB41_RS03080
• Genome accession: NZ_LR129840
• Coordinates: 552485..552751 (+)
• Length: 88 a.a.
• NCBI ID: WP_001811621.1
• Uniprot ID: A0AAP5J8I9
• Organism: Streptococcus pneumoniae strain 4496 isolate 4496
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	551912..552406	552485..552751	flank	79

Gene organization within MGE regions

Location: 551912..552751

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQB41_RS03075	-	551912..552400 (+)	489	Protein_579	transposase	-
EQB41_RS03080	HI0659	552485..552751 (+)	267	WP_001811621.1	helix-turn-helix domain-containing protein	Machinery gene

Sequence

Protein

• Length: 88 a.a.
• Molecular weight: 9560.13 Da
• Isoelectric Point: 4.8274

>NTDB_id=1116183 EQB41_RS03080 WP_001811621.1 552485..552751(+) (HI0659) [Streptococcus pneumoniae strain 4496 isolate 4496]
MEGCLSELFSKEEILESDMRVAIMSELIEARNKQGISQKKLEEVSGVSQPVIARMETGKTSPQLDTVLKVLASLGKTLAV
VPLEQGKS

Nucleotide

• Length: 267 bp

>NTDB_id=1116183 EQB41_RS03080 WP_001811621.1 552485..552751(+) (HI0659) [Streptococcus pneumoniae strain 4496 isolate 4496]
TTGGAAGGATGTCTATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTAGCTATCATGAGCGAGTT
GATTGAAGCCAGAAATAAGCAAGGAATCAGTCAGAAAAAGCTAGAGGAAGTCAGTGGAGTGAGTCAGCCTGTTATAGCTA
GGATGGAGACAGGTAAGACTAGTCCACAGTTGGACACAGTCTTAAAAGTCCTAGCTAGTCTAGGAAAGACACTAGCAGTC
GTTCCACTTGAACAGGGGAAAAGTTGA

Domains

Predicted by InterproScan.

• Helix-turn-helix (HTH_3) (28-79)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
HI0659	Haemophilus influenzae Rd KW20	61.039	87.5	0.534