Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   E0E09_RS11615 Genome accession   NZ_LR027869
Coordinates   2193153..2193869 (+) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   A0A7U7IEW1
Organism   Staphylococcus aureus isolate BPH2869     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2188153..2198869
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E0E09_RS11585 - 2188372..2188998 (+) 627 WP_000522384.1 nitroreductase family protein -
  E0E09_RS11590 - 2189359..2190144 (+) 786 WP_000867960.1 carbon-nitrogen family hydrolase -
  E0E09_RS16215 hld 2190741..2190821 (-) 81 WP_000046022.1 delta-hemolysin -
  E0E09_RS11600 agrB 2191111..2191680 (+) 570 WP_001105707.1 accessory gene regulator AgrB -
  E0E09_RS11605 agrD 2191677..2191817 (+) 141 WP_001093929.1 cyclic lactone autoinducer peptide AgrD -
  E0E09_RS11610 agrC 2191842..2193134 (+) 1293 WP_001554031.1 quorum-sensing sensor histidine kinase AgrC -
  E0E09_RS11615 agrA 2193153..2193869 (+) 717 WP_000688492.1 quorum-sensing response regulator AgrA Regulator
  E0E09_RS11620 - 2193941..2194048 (+) 108 WP_001790167.1 hypothetical protein -
  E0E09_RS11625 - 2194236..2195195 (-) 960 WP_001253312.1 carbohydrate kinase family protein -
  E0E09_RS11630 - 2195192..2196676 (-) 1485 WP_000141417.1 sucrose-6-phosphate hydrolase -
  E0E09_RS11635 - 2196825..2197775 (-) 951 WP_000790330.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=1115804 E0E09_RS11615 WP_000688492.1 2193153..2193869(+) (agrA) [Staphylococcus aureus isolate BPH2869]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=1115804 E0E09_RS11615 WP_000688492.1 2193153..2193869(+) (agrA) [Staphylococcus aureus isolate BPH2869]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACCTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCTGAATTAAGAACTCGAATTATAGACTGTTTAGAAACTGCACATACACGCTTACAATTGT
TGTCTAAAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATAG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7IEW1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1

Multiple sequence alignment