Detailed information NTG1115726

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: TTHNP4_RS06800
• Genome accession: NZ_LR027517
• Coordinates: 1232594..1233508 (+)
• Length: 304 a.a.
• NCBI ID: WP_124104914.1
• Uniprot ID: -
• Organism: Thermus thermophilus isolate TTHNAR1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1227594..1238508

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
TTHNP4_RS06775 (TTHN1_01362)	prmC	1227807..1228703 (+)	897	WP_124104910.1	peptide chain release factor N(5)-glutamine methyltransferase	-
TTHNP4_RS06780 (TTHN1_01363)	-	1228602..1229945 (-)	1344	WP_124104911.1	DUF3084 domain-containing protein	-
TTHNP4_RS06785 (TTHN1_01364)	lptB	1229948..1230676 (-)	729	WP_014630089.1	LPS export ABC transporter ATP-binding protein	-
TTHNP4_RS06790 (TTHN1_01365)	gltX	1230731..1232137 (+)	1407	WP_124104912.1	glutamate--tRNA ligase	-
TTHNP4_RS06795 (TTHN1_01366)	-	1232154..1232594 (+)	441	WP_124104913.1	hypothetical protein	-
TTHNP4_RS06800 (TTHN1_01367)	pilA	1232594..1233508 (+)	915	WP_124104914.1	signal recognition particle-docking protein FtsY	Machinery gene
TTHNP4_RS06805 (TTHN1_01368)	-	1233578..1234003 (+)	426	WP_008631686.1	disulfide bond formation protein B	-
TTHNP4_RS06810 (TTHN1_01369)	-	1233948..1234433 (-)	486	WP_124104915.1	hypothetical protein	-
TTHNP4_RS06815 (TTHN1_01370)	-	1234474..1234704 (+)	231	WP_124104916.1	hypothetical protein	-
TTHNP4_RS06820 (TTHN1_01371)	guaB	1234710..1236191 (-)	1482	WP_124104917.1	IMP dehydrogenase	-
TTHNP4_RS06825 (TTHN1_01372)	-	1236336..1237256 (+)	921	WP_124104918.1	carbohydrate kinase family protein	-
TTHNP4_RS06830 (TTHN1_01373)	hisH	1237227..1237823 (-)	597	WP_124104919.1	imidazole glycerol phosphate synthase subunit HisH	-

Sequence

Protein

• Length: 304 a.a.
• Molecular weight: 32753.21 Da
• Isoelectric Point: 9.6959

>NTDB_id=1115726 TTHNP4_RS06800 WP_124104914.1 1232594..1233508(+) (pilA) [Thermus thermophilus isolate TTHNAR1]
MGLFDRLRAGLAKTRERLLKAIPWGGDPEEVLEELEMALLAADVGVAATEELLKEVRASGRRDLKEVVKEKLVQMLEPDE
RRATLRKLGFRPQKLRPVEPKGHVVMVVGVNGVGKTTTIAKLGRLYQGLGKKVLFCAGDTFRAAGSTQLAEWGKRLGIPV
IQGPEGADPAALAFDAAQARKARGLDLLFVDTAGRLHTKQGLMEELKKVKRAIAKADPGEPGEVWLVLDAVTGQNGLEQA
KRFHEAVGLTGVIVTKLDGTAKGGVLVPIVRTLKVPIRFIGVGEGPDDLQPFDAEAFVEALLEA

Nucleotide

• Length: 915 bp

>NTDB_id=1115726 TTHNP4_RS06800 WP_124104914.1 1232594..1233508(+) (pilA) [Thermus thermophilus isolate TTHNAR1]
ATGGGCCTCTTTGACCGGCTCAGGGCGGGCCTCGCCAAGACCCGGGAAAGGCTCCTCAAGGCCATCCCCTGGGGCGGCGA
CCCCGAGGAGGTCCTGGAGGAGCTGGAGATGGCCCTCCTCGCCGCCGACGTGGGGGTGGCGGCCACGGAGGAGCTCCTCA
AGGAGGTGCGGGCCTCGGGGCGGCGGGACCTGAAAGAGGTGGTGAAGGAGAAGCTCGTCCAGATGCTGGAGCCGGACGAG
CGGCGGGCCACACTGAGGAAGCTCGGCTTCCGTCCCCAGAAGCTCCGCCCCGTGGAGCCTAAGGGGCACGTGGTGATGGT
GGTGGGGGTGAACGGGGTGGGCAAGACCACCACCATCGCCAAGCTGGGCCGCCTCTACCAGGGCCTCGGCAAGAAGGTCC
TCTTCTGCGCCGGGGACACCTTCCGCGCCGCAGGCAGCACCCAGCTCGCCGAGTGGGGGAAGCGCCTCGGGATCCCGGTG
ATCCAGGGCCCCGAGGGGGCGGACCCCGCCGCCCTCGCCTTTGACGCCGCCCAGGCCCGCAAAGCCCGGGGCCTGGACCT
CCTCTTCGTGGATACCGCAGGCCGCCTCCACACCAAGCAGGGCCTCATGGAGGAGCTCAAGAAGGTGAAGCGGGCCATCG
CCAAAGCGGACCCCGGGGAGCCGGGGGAGGTGTGGCTCGTGCTGGACGCCGTCACCGGGCAGAACGGCCTGGAGCAGGCC
AAGCGCTTCCACGAGGCCGTGGGCCTCACCGGAGTCATCGTCACCAAGCTGGACGGGACGGCCAAGGGCGGGGTCCTGGT
CCCCATCGTCCGCACCCTAAAGGTGCCCATCCGCTTCATCGGCGTGGGGGAAGGCCCGGACGACCTCCAGCCCTTTGACG
CCGAGGCCTTCGTGGAGGCCCTTCTCGAGGCCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (29-65)

• SRP54-type protein, GTPase domain (SRP54) (103-302)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	49.363	100	0.51