Detailed information    

insolico Bioinformatically predicted

Overview


Name   tsaP   Type   Machinery gene
Locus tag   ABR2091_RS00885 Genome accession   NZ_LN997846
Coordinates   192159..193313 (-) Length   384 a.a.
NCBI ID   WP_058207667.1    Uniprot ID   A0A505ZVD9
Organism   Acinetobacter baumannii isolate R2091     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 187159..198313
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABR2091_RS00865 (ABR2091_0178) - 188320..188970 (+) 651 WP_087937506.1 TetR/AcrR family transcriptional regulator -
  ABR2091_RS00870 (ABR2091_0179) - 189076..189996 (+) 921 WP_000084546.1 DMT family transporter -
  ABR2091_RS00875 (ABR2091_0180) - 190388..190957 (-) 570 WP_000633612.1 L-threonylcarbamoyladenylate synthase -
  ABR2091_RS00880 (ABR2091_0181) dprA 191008..192138 (-) 1131 WP_031967017.1 DNA-processing protein DprA Machinery gene
  ABR2091_RS00885 (ABR2091_0182) tsaP 192159..193313 (-) 1155 WP_058207667.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  ABR2091_RS00890 (ABR2091_0183) def 193436..193966 (+) 531 WP_001196539.1 peptide deformylase -
  ABR2091_RS00895 (ABR2091_0184) - 194003..194431 (+) 429 WP_000231981.1 DUF2946 family protein -
  ABR2091_RS00900 (ABR2091_0185) - 194504..196585 (+) 2082 WP_001120682.1 TonB-dependent copper receptor -
  ABR2091_RS00905 (ABR2091_0186) - 196635..196841 (+) 207 WP_000182542.1 hypothetical protein -
  ABR2091_RS00910 (ABR2091_0187) - 196911..198125 (-) 1215 WP_001177956.1 oxygenase MpaB family protein -

Sequence


Protein


Download         Length: 384 a.a.        Molecular weight: 42382.32 Da        Isoelectric Point: 8.5909

>NTDB_id=1115331 ABR2091_RS00885 WP_058207667.1 192159..193313(-) (tsaP) [Acinetobacter baumannii isolate R2091]
MKKVFNGMVNFHALGIKKHLLALALCTGVAIGTIAEVHATSPNHNPPSLKSNAPNVYVVKRGDTLWDISGHFLNKPWRWP
EIWASNQHVKNPHWIYPGDRLLLCSLDGRPLVGKDEGDGCFGIIRRYTGQTTNLQPQVRVEALNNSVPVIPLEHIKQWLE
NSTILPADSITNTPYIVGTADQRVLAGKGQTIYARGQGLINGQRYAVYREGEPYYFTDNKGKKHSLGIELLQVASGVAVS
SEKDITTLELTDSYNAEVRRGDRVMPEEQATLPTLFYPVDAKQVTDGGKIIRVMGSIGRAAKNSVVTLDRGTTQGIQVGQ
VFDITQQGESIRDPKTKEVIQLPGQQIGSLMVFRTFDQLSYAFVLESDLPIKVGSSIQPPQFND

Nucleotide


Download         Length: 1155 bp        

>NTDB_id=1115331 ABR2091_RS00885 WP_058207667.1 192159..193313(-) (tsaP) [Acinetobacter baumannii isolate R2091]
ATGAAAAAGGTTTTTAACGGCATGGTTAATTTTCATGCCTTGGGGATAAAGAAGCATTTACTTGCCTTGGCGCTCTGTAC
AGGTGTCGCAATCGGTACGATAGCAGAGGTTCATGCAACCAGTCCGAACCATAATCCACCCTCACTTAAAAGTAATGCAC
CCAATGTATATGTTGTAAAACGTGGGGATACTTTATGGGATATTTCAGGACATTTTCTAAATAAACCATGGCGTTGGCCT
GAAATCTGGGCGAGCAACCAACATGTTAAAAATCCACACTGGATCTATCCGGGTGACCGATTACTATTATGTAGCCTAGA
TGGGCGTCCTTTAGTCGGTAAAGATGAGGGCGATGGTTGTTTCGGTATTATTCGCCGCTATACAGGTCAAACCACAAACC
TACAACCACAAGTTCGCGTCGAAGCATTAAATAATAGCGTTCCAGTTATTCCACTTGAACATATTAAACAGTGGTTAGAG
AACAGTACTATTTTACCAGCCGATTCAATTACCAACACACCTTATATTGTTGGTACCGCCGATCAACGTGTACTTGCAGG
AAAAGGCCAGACTATTTATGCACGAGGACAAGGCTTAATTAATGGGCAGCGTTATGCAGTCTACCGAGAAGGTGAACCTT
ACTATTTCACAGACAATAAAGGTAAAAAGCATAGTTTAGGGATTGAACTACTACAGGTTGCTTCAGGTGTTGCGGTATCT
TCTGAAAAAGATATTACTACATTAGAACTAACAGATAGTTATAACGCTGAAGTACGTCGTGGCGATCGTGTTATGCCTGA
AGAACAAGCTACTTTGCCAACATTATTTTACCCAGTAGATGCGAAGCAAGTGACGGATGGTGGCAAGATTATTCGTGTCA
TGGGCTCAATTGGTAGAGCTGCAAAAAATAGTGTAGTGACTTTGGATCGCGGTACAACTCAGGGCATTCAAGTAGGTCAA
GTTTTTGATATTACTCAACAAGGTGAATCAATTCGCGACCCTAAAACCAAAGAAGTGATTCAACTTCCTGGCCAACAAAT
TGGCAGTCTAATGGTTTTTAGAACTTTTGATCAGCTAAGTTATGCTTTTGTTTTAGAGAGCGATTTACCAATTAAGGTTG
GTTCAAGCATTCAGCCACCTCAATTTAATGATTAA

Domains


Predicted by InterproScan.

(57-102)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A505ZVD9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

98.958

100

0.99


Multiple sequence alignment