Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   BN2297_RS19200 Genome accession   NZ_LN879547
Coordinates   4227109..4227513 (-) Length   134 a.a.
NCBI ID   WP_003071158.1    Uniprot ID   A0A5S4T294
Organism   Comamonas thiooxydans isolate C19     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4222109..4232513
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BN2297_RS19185 - 4223941..4226184 (-) 2244 WP_046461795.1 methyl-accepting chemotaxis protein -
  BN2297_RS19190 - 4226204..4226731 (-) 528 WP_003071161.1 chemotaxis protein CheW -
  BN2297_RS19195 - 4226747..4227109 (-) 363 WP_003071159.1 response regulator -
  BN2297_RS19200 pilG 4227109..4227513 (-) 405 WP_003071158.1 response regulator Regulator
  BN2297_RS26290 - 4227564..4227716 (-) 153 WP_034399566.1 rubredoxin -
  BN2297_RS19205 thiD 4227832..4228800 (+) 969 WP_012839730.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  BN2297_RS19210 hemL 4228784..4230088 (+) 1305 WP_003071150.1 glutamate-1-semialdehyde 2,1-aminomutase -
  BN2297_RS19215 - 4230251..4232023 (+) 1773 WP_057094796.1 alkaline phosphatase D family protein -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14667.90 Da        Isoelectric Point: 6.9230

>NTDB_id=1115009 BN2297_RS19200 WP_003071158.1 4227109..4227513(-) (pilG) [Comamonas thiooxydans isolate C19]
MTASGAPLRVLVVDDSNTIRRSAEIFLKQGGHEVLLADDGFDALSKVNDYQPQLIFCDILMPKLDGYQTCAIIKRNARFA
NTPVVMLSSKDGVFDKARGRMVGCQDYLTKPFTKDQLLQAVQQFALQAADVGAA

Nucleotide


Download         Length: 405 bp        

>NTDB_id=1115009 BN2297_RS19200 WP_003071158.1 4227109..4227513(-) (pilG) [Comamonas thiooxydans isolate C19]
GTGACAGCATCTGGTGCGCCTTTGCGCGTTCTGGTCGTGGATGACAGCAACACCATCCGCCGCAGCGCTGAAATTTTCCT
CAAGCAAGGTGGTCACGAAGTTCTTCTTGCCGACGATGGCTTCGATGCCCTGTCCAAGGTCAATGACTACCAGCCCCAGC
TCATCTTCTGCGACATTCTGATGCCCAAACTCGATGGCTATCAGACCTGCGCCATCATCAAGCGCAATGCTCGCTTTGCC
AATACGCCCGTCGTGATGCTGTCATCCAAGGACGGTGTATTCGACAAGGCTCGCGGTCGCATGGTGGGCTGCCAGGACTA
TCTGACCAAACCGTTTACCAAAGATCAATTGCTGCAAGCCGTACAACAATTCGCGCTGCAAGCTGCAGATGTGGGAGCTG
CATGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5S4T294

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

58.621

86.567

0.507

Multiple sequence alignment