Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   KKKWG1_RS06720 Genome accession   NZ_LN869922
Coordinates   1314984..1315436 (-) Length   150 a.a.
NCBI ID   WP_038317204.1    Uniprot ID   -
Organism   Kingella kingae strain KWG1     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1309984..1320436
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KKKWG1_RS06695 (KKKWG1_1364) - 1310154..1310456 (-) 303 WP_019389050.1 HU family DNA-binding protein -
  KKKWG1_RS06700 (KKKWG1_1365) lon 1310647..1313073 (-) 2427 WP_019389049.1 endopeptidase La -
  KKKWG1_RS06705 (KKKWG1_1367) - 1313275..1313841 (-) 567 WP_060537076.1 ISAs1 family transposase -
  KKKWG1_RS06710 (KKKWG1_1368) - 1313869..1314117 (-) 249 WP_230311240.1 transposase family protein -
  KKKWG1_RS06715 (KKKWG1_1369) - 1314298..1314738 (-) 441 WP_003787024.1 CZB domain-containing protein -
  KKKWG1_RS06720 (KKKWG1_1370) recX 1314984..1315436 (-) 453 WP_038317204.1 recombination regulator RecX Regulator
  KKKWG1_RS06725 (KKKWG1_1371) - 1315597..1316076 (-) 480 WP_003787019.1 hypothetical protein -
  KKKWG1_RS06730 (KKKWG1_1372) - 1316069..1317376 (-) 1308 WP_003787017.1 homoserine dehydrogenase -
  KKKWG1_RS06735 (KKKWG1_1373) - 1317476..1317835 (+) 360 WP_019389047.1 Mth938-like domain-containing protein -
  KKKWG1_RS06740 (KKKWG1_1374) dapE 1317901..1319025 (-) 1125 WP_019389046.1 succinyl-diaminopimelate desuccinylase -
  KKKWG1_RS06745 (KKKWG1_1375) - 1319063..1320220 (-) 1158 WP_003790548.1 glycerate kinase -

Sequence

Protein


Download         Length: 150 a.a.        Molecular weight: 17529.83 Da        Isoelectric Point: 9.5349

>NTDB_id=1114883 KKKWG1_RS06720 WP_038317204.1 1314984..1315436(-) (recX) [Kingella kingae strain KWG1]
MKTEKSLRARAMEMMSRREMSQAELRAKLLPHANDSDELDAVLAEFAKNNWQSDERFAEAFVRSKSSKHGVGRLHQELRQ
RGVSAELIQQYLPDRETELDNAIEVARKKFKQPAQNRQEWDKQMRFMLYRGFAMATAQAALKRAWADDEE

Nucleotide


Download         Length: 453 bp        

>NTDB_id=1114883 KKKWG1_RS06720 WP_038317204.1 1314984..1315436(-) (recX) [Kingella kingae strain KWG1]
ATGAAAACCGAAAAATCACTCCGCGCCCGAGCGATGGAAATGATGTCGCGCCGTGAAATGAGCCAAGCCGAATTACGCGC
TAAATTGTTGCCCCACGCCAACGATAGCGATGAATTGGACGCGGTGTTGGCAGAATTTGCGAAAAACAACTGGCAATCGG
ACGAGCGATTTGCAGAAGCGTTTGTTCGCAGCAAAAGTAGTAAACACGGCGTAGGACGTTTGCACCAAGAATTGCGGCAA
CGCGGCGTATCGGCAGAATTAATTCAGCAATATTTGCCCGACCGCGAAACAGAATTGGATAACGCAATAGAAGTCGCCCG
CAAAAAATTCAAGCAGCCTGCACAAAATCGGCAGGAATGGGACAAGCAAATGCGTTTTATGTTGTATCGCGGTTTTGCGA
TGGCAACGGCGCAGGCTGCTTTGAAACGCGCTTGGGCAGACGATGAAGAATAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(34-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

54.667

100

0.547

Multiple sequence alignment