Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | ABCIP7010_RS16595 | Genome accession | NZ_LN865143 |
| Coordinates | 3561782..3562207 (-) | Length | 141 a.a. |
| NCBI ID | WP_000788337.1 | Uniprot ID | A0A009SG52 |
| Organism | Acinetobacter baumannii isolate CIP70.10 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 3556782..3567207
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABCIP7010_RS16565 (ABCIP7010_3349) | - | 3557314..3558345 (+) | 1032 | WP_001189457.1 | lipase secretion chaperone | - |
| ABCIP7010_RS16570 (ABCIP7010_3350) | - | 3558460..3559401 (+) | 942 | WP_086321537.1 | triacylglycerol lipase | - |
| ABCIP7010_RS16575 (ABCIP7010_3351) | rplS | 3559454..3559822 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| ABCIP7010_RS16580 (ABCIP7010_3352) | trmD | 3560030..3560770 (-) | 741 | WP_000464599.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| ABCIP7010_RS16585 (ABCIP7010_3353) | rimM | 3560816..3561364 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| ABCIP7010_RS16590 (ABCIP7010_3354) | rpsP | 3561384..3561635 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| ABCIP7010_RS16595 (ABCIP7010_3355) | pilE | 3561782..3562207 (-) | 426 | WP_000788337.1 | type IV pilin protein | Machinery gene |
| ABCIP7010_RS16600 (ABCIP7010_3356) | pilY2 | 3562204..3562686 (-) | 483 | WP_001046423.1 | type IV pilin protein | Machinery gene |
| ABCIP7010_RS16605 (ABCIP7010_3357) | pilY1 | 3562699..3566553 (-) | 3855 | WP_000768954.1 | PilC/PilY family type IV pilus protein | Machinery gene |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15163.36 Da Isoelectric Point: 7.8144
>NTDB_id=1114763 ABCIP7010_RS16595 WP_000788337.1 3561782..3562207(-) (pilE) [Acinetobacter baumannii isolate CIP70.10]
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=1114763 ABCIP7010_RS16595 WP_000788337.1 3561782..3562207(-) (pilE) [Acinetobacter baumannii isolate CIP70.10]
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACATTAGAATCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCATTAT
CTGCTTCATCGAGTTGGACCGAGTAA
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACATTAGAATCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCATTAT
CTGCTTCATCGAGTTGGACCGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
90.78 |
100 |
0.908 |
| comF | Acinetobacter baylyi ADP1 |
50 |
99.291 |
0.496 |