Detailed information NTG1114764

Bioinformatically predicted

Overview

• Name: pilY2
• Type: Machinery gene
• Locus tag: ABCIP7010_RS16600
• Genome accession: NZ_LN865143
• Coordinates: 3562204..3562686 (-)
• Length: 160 a.a.
• NCBI ID: WP_001046423.1
• Uniprot ID: A0A9E9MD39
• Organism: Acinetobacter baumannii isolate CIP70.10
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3557204..3567686

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABCIP7010_RS16565 (ABCIP7010_3349)	-	3557314..3558345 (+)	1032	WP_001189457.1	lipase secretion chaperone	-
ABCIP7010_RS16570 (ABCIP7010_3350)	-	3558460..3559401 (+)	942	WP_086321537.1	triacylglycerol lipase	-
ABCIP7010_RS16575 (ABCIP7010_3351)	rplS	3559454..3559822 (-)	369	WP_000014562.1	50S ribosomal protein L19	-
ABCIP7010_RS16580 (ABCIP7010_3352)	trmD	3560030..3560770 (-)	741	WP_000464599.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
ABCIP7010_RS16585 (ABCIP7010_3353)	rimM	3560816..3561364 (-)	549	WP_000189236.1	ribosome maturation factor RimM	-
ABCIP7010_RS16590 (ABCIP7010_3354)	rpsP	3561384..3561635 (-)	252	WP_000260334.1	30S ribosomal protein S16	-
ABCIP7010_RS16595 (ABCIP7010_3355)	pilE	3561782..3562207 (-)	426	WP_000788337.1	type IV pilin protein	Machinery gene
ABCIP7010_RS16600 (ABCIP7010_3356)	pilY2	3562204..3562686 (-)	483	WP_001046423.1	type IV pilin protein	Machinery gene
ABCIP7010_RS16605 (ABCIP7010_3357)	pilY1	3562699..3566553 (-)	3855	WP_000768954.1	PilC/PilY family type IV pilus protein	Machinery gene
ABCIP7010_RS16610 (ABCIP7010_3358)	pilX	3566565..3567383 (-)	819	WP_000149376.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17575.84 Da
• Isoelectric Point: 8.4834

>NTDB_id=1114764 ABCIP7010_RS16600 WP_001046423.1 3562204..3562686(-) (pilY2) [Acinetobacter baumannii isolate CIP70.10]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAVKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNSAANGQTWVIRATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCEANSEVWQ

Nucleotide

• Length: 483 bp

>NTDB_id=1114764 ABCIP7010_RS16600 WP_001046423.1 3562204..3562686(-) (pilY2) [Acinetobacter baumannii isolate CIP70.10]
ATGAATAAATACTCTATTCTACGGTTCAATCAGGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGTTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACCACAGGTAATTTATTAACAAATTCTGCTGCTAATGGTCAAAC
ATGGGTAATTAGAGCAACCACAACAGATTCGAGAAATTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGTTACAGCCGTTGATAATGATTGTGGTGGAACGACTACTTGTAATACATGTGAAGCGAACAGTGAGGTTTGGCAG
TGA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (34-127)

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY2	Acinetobacter baumannii D1279779	93.125	100	0.931
comE	Acinetobacter baylyi ADP1	38.953	100	0.419