Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   SABB155_RS13490 Genome accession   NZ_LN854556
Coordinates   2671107..2671994 (-) Length   295 a.a.
NCBI ID   WP_054189713.1    Uniprot ID   -
Organism   Staphylococcus aureus strain BB155     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2666107..2676994
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SABB155_RS13460 - 2666114..2666206 (+) 93 WP_054189707.1 hypothetical protein -
  SABB155_RS13465 (SABB155_24670) - 2666314..2666811 (-) 498 WP_054189708.1 glutathione peroxidase -
  SABB155_RS13470 - 2666821..2667081 (-) 261 WP_077446674.1 hypothetical protein -
  SABB155_RS14895 - 2667505..2667588 (-) 84 Protein_2574 hypothetical protein -
  SABB155_RS13480 (SABB155_24680) - 2668246..2670246 (-) 2001 WP_054189711.1 ABC transporter permease -
  SABB155_RS13485 (SABB155_24690) - 2670243..2670998 (-) 756 WP_054189712.1 ABC transporter ATP-binding protein -
  SABB155_RS13490 (SABB155_24700) braS 2671107..2671994 (-) 888 WP_054189713.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  SABB155_RS13495 (SABB155_24710) braR 2672005..2672670 (-) 666 WP_054189714.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  SABB155_RS13500 (SABB155_24720) - 2672696..2672896 (-) 201 WP_054189715.1 hypothetical protein -
  SABB155_RS13510 (SABB155_24730) - 2673094..2674518 (+) 1425 WP_054189717.1 alkaline phosphatase -
  SABB155_RS14965 (SABB155_24740) - 2674578..2674679 (-) 102 WP_070016594.1 SE2200 family small protein -
  SABB155_RS13515 (SABB155_24750) - 2674800..2675255 (-) 456 WP_054189718.1 MarR family winged helix-turn-helix transcriptional regulator -
  SABB155_RS13520 (SABB155_24760) - 2675500..2676261 (-) 762 WP_054189719.1 alpha/beta hydrolase -

Sequence


Protein


Download         Length: 295 a.a.        Molecular weight: 34080.47 Da        Isoelectric Point: 6.7607

>NTDB_id=1114681 SABB155_RS13490 WP_054189713.1 2671107..2671994(-) (braS) [Staphylococcus aureus strain BB155]
MTFLKSIIQEIAIVIVIFALFGLMFYLYRLPLEAYLLALGVISLLLLIFIGIKYLSFVKTISQQQQIENLENALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFNEQSNQLYIKDNGMGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDK

Nucleotide


Download         Length: 888 bp        

>NTDB_id=1114681 SABB155_RS13490 WP_054189713.1 2671107..2671994(-) (braS) [Staphylococcus aureus strain BB155]
ATGACCTTTCTTAAAAGTATTATTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCGTTTGCCATTAGAAGCGTATTTACTAGCACTTGGCGTTATTTCATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAAATGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAACCTAATGTTGTGAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAATTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAACAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAACTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTAATGAACAATCTAATCAATTATATATAAAAGATAATGGTATGGGTATTAGTGAAGCAGACTTGCCTAAA
ATATTTGATAAAGGCTATTCAGGTTATAATGGCCAGCGTCAAAGTAACTCAAGTGGGATTGGTTTATTTATCGTAAAACA
AATTTCAACTCATACAAACCATCCTGTTTCAGTCGTGTCTAAACAAAATGAGGGTACAACTTTTACGATTCAATTTCCAG
ATAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

96.949

100

0.969


Multiple sequence alignment