Detailed information
Bioinformatically predicted
Overview
| Name | rcrQ | Type | Regulator |
| Locus tag | PRIO_RS16050 | Genome accession | NZ_LN831776 |
| Coordinates | 3839462..3839881 (+) | Length | 139 a.a. |
| NCBI ID | WP_020434186.1 | Uniprot ID | A0A0E4CWU7 |
| Organism | Paenibacillus riograndensis SBR5 isolate SBR5(T) | ||
| Function | regulate competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3834462..3844881
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PRIO_RS16025 (PRIO_3252) | - | 3834468..3835259 (+) | 792 | WP_046503434.1 | HAD-IIB family hydrolase | - |
| PRIO_RS16030 (PRIO_3253) | - | 3835425..3836858 (+) | 1434 | WP_052741467.1 | MATE family efflux transporter | - |
| PRIO_RS36815 (PRIO_3254) | - | 3837062..3838075 (+) | 1014 | WP_231869913.1 | ABC transporter permease | - |
| PRIO_RS36820 (PRIO_3255) | - | 3838024..3838797 (+) | 774 | WP_020434188.1 | ABC transporter ATP-binding protein | - |
| PRIO_RS16040 (PRIO_3256) | - | 3838799..3839158 (+) | 360 | WP_039791365.1 | hypothetical protein | - |
| PRIO_RS16045 (PRIO_3257) | - | 3839107..3839493 (+) | 387 | WP_167345626.1 | ABC transporter transmembrane domain-containing protein | - |
| PRIO_RS16050 (PRIO_3258) | rcrQ | 3839462..3839881 (+) | 420 | WP_020434186.1 | ATP-binding cassette domain-containing protein | Regulator |
| PRIO_RS16055 (PRIO_3259) | - | 3839963..3840169 (-) | 207 | WP_020434185.1 | DUF1657 domain-containing protein | - |
| PRIO_RS16060 (PRIO_3260) | - | 3840343..3841203 (+) | 861 | WP_020434184.1 | DUF421 domain-containing protein | - |
| PRIO_RS33900 (PRIO_3261) | - | 3842094..3843470 (+) | 1377 | WP_407944497.1 | right-handed parallel beta-helix repeat-containing protein | - |
| PRIO_RS16070 (PRIO_3262) | - | 3843744..3844724 (+) | 981 | WP_020434181.1 | MoxR family ATPase | - |
Sequence
Protein
Download Length: 139 a.a. Molecular weight: 15168.08 Da Isoelectric Point: 6.2254
>NTDB_id=1114432 PRIO_RS16050 WP_020434186.1 3839462..3839881(+) (rcrQ) [Paenibacillus riograndensis SBR5 isolate SBR5(T)]
MPRSSLPQGYDTILSAEGGNLSQGQKQLITIARAMLSDRALLILDEATSSVDTLAEIQIQKAVKQVISGRTSFVIAHRLS
TIRHADTILVIQDGRIAEQGNHEQLLQRKGLYYELQSSGSGFAEEAEQSFTGSVSSYCR
MPRSSLPQGYDTILSAEGGNLSQGQKQLITIARAMLSDRALLILDEATSSVDTLAEIQIQKAVKQVISGRTSFVIAHRLS
TIRHADTILVIQDGRIAEQGNHEQLLQRKGLYYELQSSGSGFAEEAEQSFTGSVSSYCR
Nucleotide
Download Length: 420 bp
>NTDB_id=1114432 PRIO_RS16050 WP_020434186.1 3839462..3839881(+) (rcrQ) [Paenibacillus riograndensis SBR5 isolate SBR5(T)]
TTGCCTCGGAGTTCATTACCGCAAGGATATGATACTATACTGTCAGCAGAGGGAGGCAATCTCAGCCAGGGGCAGAAGCA
GCTGATTACCATCGCCCGGGCGATGCTTTCCGACCGTGCACTGCTTATCCTGGATGAAGCGACAAGCAGTGTGGATACAC
TGGCAGAGATCCAAATCCAAAAGGCGGTCAAGCAAGTGATCTCCGGCAGAACCAGCTTTGTCATTGCCCATAGGCTGAGT
ACCATCCGCCATGCCGATACCATTTTGGTCATTCAGGATGGACGGATTGCCGAGCAGGGCAATCATGAACAGCTGCTGCA
GCGTAAAGGCCTGTATTATGAGCTGCAGAGCAGCGGCAGCGGTTTTGCCGAAGAAGCTGAGCAATCTTTTACTGGAAGTG
TGTCTTCCTATTGCCGATAA
TTGCCTCGGAGTTCATTACCGCAAGGATATGATACTATACTGTCAGCAGAGGGAGGCAATCTCAGCCAGGGGCAGAAGCA
GCTGATTACCATCGCCCGGGCGATGCTTTCCGACCGTGCACTGCTTATCCTGGATGAAGCGACAAGCAGTGTGGATACAC
TGGCAGAGATCCAAATCCAAAAGGCGGTCAAGCAAGTGATCTCCGGCAGAACCAGCTTTGTCATTGCCCATAGGCTGAGT
ACCATCCGCCATGCCGATACCATTTTGGTCATTCAGGATGGACGGATTGCCGAGCAGGGCAATCATGAACAGCTGCTGCA
GCGTAAAGGCCTGTATTATGAGCTGCAGAGCAGCGGCAGCGGTTTTGCCGAAGAAGCTGAGCAATCTTTTACTGGAAGTG
TGTCTTCCTATTGCCGATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rcrQ | Streptococcus mutans UA159 |
60.656 |
87.77 |
0.532 |
| comA/nlmT | Streptococcus mutans UA159 |
47.273 |
79.137 |
0.374 |