Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   AT689_RS11065 Genome accession   NZ_LN831051
Coordinates   2090311..2091042 (-) Length   243 a.a.
NCBI ID   WP_000889923.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain NCTC7465     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2085311..2096042
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AT689_RS11035 (ERS445053_02157) blpC 2085858..2086013 (+) 156 WP_000358812.1 quorum-sensing system pheromone BlpC -
  AT689_RS11040 (ERS445053_02158) - 2086057..2087397 (-) 1341 WP_001099894.1 sensor histidine kinase -
  AT689_RS11045 (ERS445053_02159) comE/blpR 2087411..2088148 (-) 738 WP_001219137.1 LytTR family DNA-binding domain-containing protein Regulator
  AT689_RS11050 (ERS445053_02160) - 2088153..2088491 (-) 339 WP_000682136.1 LytTR family DNA-binding domain-containing protein -
  AT689_RS11055 (ERS445053_02161) - 2088768..2089097 (+) 330 WP_000132583.1 hypothetical protein -
  AT689_RS11060 (ERS445053_02162) - 2089265..2090314 (-) 1050 WP_000653768.1 ABC transporter permease -
  AT689_RS11065 (ERS445053_02163) pptA 2090311..2091042 (-) 732 WP_000889923.1 ABC transporter ATP-binding protein Regulator
  AT689_RS11070 (ERS445053_02164) - 2091110..2091520 (+) 411 WP_001278301.1 HIT family protein -
  AT689_RS11075 (ERS445053_02165) - 2091530..2091817 (+) 288 WP_000777760.1 hypothetical protein -
  AT689_RS12955 (ERS445053_02166) - 2091979..2092353 (+) 375 WP_001845059.1 hypothetical protein -
  AT689_RS11080 (ERS445053_02167) dnaJ 2092675..2093811 (-) 1137 WP_001836079.1 molecular chaperone DnaJ -
  AT689_RS11085 (ERS445053_02168) - 2094016..2094369 (-) 354 WP_000115730.1 hypothetical protein -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 27026.52 Da        Isoelectric Point: 4.7792

>NTDB_id=1114416 AT689_RS11065 WP_000889923.1 2090311..2091042(-) (pptA) [Streptococcus pneumoniae strain NCTC7465]
MLEIKNLTGGYVHVPVLKDVSFTVESGQLVGLIGLNGAGKSTTINEIIGLLAPYSGSININGLTLQGDATSYRKQIGYIP
ETPSLYEELTLREHIETVAMAYGIEQKVAFERVEPLLKMFRLEQKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPLAISDLIQLLEVEKQKGKSILMSTHVLDSAEKMCDAFVILHKGEVRAKGNLLQLREAFDMPEASLNDIYLALTKE
EDL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=1114416 AT689_RS11065 WP_000889923.1 2090311..2091042(-) (pptA) [Streptococcus pneumoniae strain NCTC7465]
ATGTTAGAAATTAAAAACCTGACAGGTGGCTATGTTCATGTTCCTGTTTTGAAAGATGTGTCCTTTACTGTTGAAAGTGG
GCAGTTGGTCGGTTTGATTGGTCTCAATGGTGCTGGGAAATCAACGACGATCAATGAGATTATCGGTCTGTTGGCACCTT
ATAGTGGCTCCATCAATATCAATGGCCTGACTCTGCAAGGAGATGCGACTAGCTACCGCAAGCAGATTGGCTACATTCCT
GAGACGCCTAGTCTGTATGAGGAATTGACCCTCAGAGAGCATATCGAAACGGTTGCTATGGCTTACGGTATTGAGCAAAA
AGTGGCTTTCGAACGAGTAGAGCCCTTGTTAAAAATGTTCCGTTTGGAACAGAAATTAGACTGGTTCCCTGTTCATTTTT
CAAAAGGGATGAAGCAGAAGGTCATGATTATCTGTGCTTTTGTGGTGGATCCAAGTCTTTTCATCGTGGATGAGCCTTTC
CTTGGTCTTGATCCGCTGGCTATTTCTGATTTGATTCAGCTTTTGGAAGTGGAGAAGCAAAAGGGCAAGTCTATTCTCAT
GAGTACCCACGTGCTGGATTCGGCGGAGAAGATGTGTGATGCCTTTGTCATTCTTCACAAGGGAGAGGTGCGTGCCAAAG
GCAATCTCCTGCAACTACGTGAAGCCTTTGATATGCCTGAGGCTAGTTTGAATGATATTTACTTGGCTCTGACCAAAGAG
GAGGATCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.199

99.177

0.716
  pptA Streptococcus thermophilus LMD-9

71.369

99.177

0.708

Multiple sequence alignment