Detailed information
Bioinformatically predicted
Overview
| Name | waaF | Type | Regulator |
| Locus tag | AT682_RS06085 | Genome accession | NZ_LN831025 |
| Coordinates | 1189756..1190709 (+) | Length | 317 a.a. |
| NCBI ID | WP_002839071.1 | Uniprot ID | A0A5Z1EHW0 |
| Organism | Campylobacter jejuni strain NCTC11351 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1184756..1195709
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AT682_RS06060 (ERS445056_01252) | neuC | 1185332..1186456 (+) | 1125 | WP_002882962.1 | UDP-N-acetylglucosamine 2-epimerase | - |
| AT682_RS06065 (ERS445056_01253) | - | 1186449..1187066 (+) | 618 | WP_016818193.1 | glycosyltransferase | - |
| AT682_RS09630 (ERS445056_01254) | - | 1187063..1187395 (+) | 333 | WP_016818192.1 | hypothetical protein | - |
| AT682_RS06070 (ERS445056_01255) | - | 1187392..1188057 (+) | 666 | WP_002869017.1 | cytidylyltransferase domain-containing protein | - |
| AT682_RS06075 (ERS445056_01256) | - | 1188045..1188878 (+) | 834 | WP_002882959.1 | CatB-related O-acetyltransferase | - |
| AT682_RS06080 (ERS445056_01257) | - | 1188870..1189697 (-) | 828 | WP_002869015.1 | glycosyltransferase family 2 protein | - |
| AT682_RS06085 (ERS445056_01258) | waaF | 1189756..1190709 (+) | 954 | WP_002839071.1 | glycosyltransferase family 9 protein | Regulator |
| AT682_RS06090 (ERS445056_01259) | - | 1190716..1191471 (-) | 756 | WP_002869013.1 | glycosyltransferase family 25 protein | - |
| AT682_RS06095 (ERS445056_01260) | gmhA | 1191471..1192031 (-) | 561 | WP_002869012.1 | D-sedoheptulose 7-phosphate isomerase | - |
| AT682_RS06100 (ERS445056_01261) | rfaE1 | 1192028..1193413 (-) | 1386 | WP_002882955.1 | D-glycero-beta-D-manno-heptose-7-phosphate kinase | - |
| AT682_RS06105 (ERS445056_01262) | rfaD | 1193406..1194359 (-) | 954 | WP_002882954.1 | ADP-glyceromanno-heptose 6-epimerase | - |
| AT682_RS06110 (ERS445056_01263) | gmhB | 1194360..1194920 (-) | 561 | WP_002882953.1 | D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase | - |
| AT682_RS06115 (ERS445056_01264) | - | 1195002..1195304 (+) | 303 | WP_002852762.1 | c-type cytochrome | - |
| AT682_RS06120 (ERS445056_01265) | ccoS | 1195327..1195533 (-) | 207 | WP_002852798.1 | cbb3-type cytochrome oxidase assembly protein CcoS | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 36557.15 Da Isoelectric Point: 10.2875
>NTDB_id=1114160 AT682_RS06085 WP_002839071.1 1189756..1190709(+) (waaF) [Campylobacter jejuni strain NCTC11351]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDVSYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENARWVHLNLACMPCMQKTCPLKHHKCMKDLKPEIIIEVSKQLLFLN
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDVSYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENARWVHLNLACMPCMQKTCPLKHHKCMKDLKPEIIIEVSKQLLFLN
Nucleotide
Download Length: 954 bp
>NTDB_id=1114160 AT682_RS06085 WP_002839071.1 1189756..1190709(+) (waaF) [Campylobacter jejuni strain NCTC11351]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCGCCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGCAAAATCGATTTTAGCTTTGCT
TTTAGGTCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACGAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGTGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACTACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAGATGGGTGCATTTAAATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAACCAGAAATCATCATAGAAGTAAGTAAACAATTGCTATTTCTAAATTAA
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCGCCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGCAAAATCGATTTTAGCTTTGCT
TTTAGGTCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACGAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGTGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACTACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAGATGGGTGCATTTAAATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAACCAGAAATCATCATAGAAGTAAGTAAACAATTGCTATTTCTAAATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| waaF | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
93.631 |
99.054 |
0.927 |