Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | BN1209_RS06645 | Genome accession | NZ_LN794158 |
| Coordinates | 1332341..1333324 (+) | Length | 327 a.a. |
| NCBI ID | WP_045751479.1 | Uniprot ID | A0A0B7J136 |
| Organism | Candidatus Methylopumilus turicensis strain MMS-10A-171 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1327341..1338324
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BN1209_RS06620 (BN1209_1330) | - | 1327594..1328298 (+) | 705 | WP_045751474.1 | MBL fold metallo-hydrolase | - |
| BN1209_RS06625 (BN1209_1331) | - | 1328381..1329229 (+) | 849 | WP_045751475.1 | sulfite exporter TauE/SafE family protein | - |
| BN1209_RS06630 (BN1209_1332) | cysT | 1329395..1330228 (+) | 834 | WP_045751476.1 | sulfate ABC transporter permease subunit CysT | - |
| BN1209_RS06635 (BN1209_1333) | cysW | 1330240..1331130 (+) | 891 | WP_045751477.1 | sulfate ABC transporter permease subunit CysW | - |
| BN1209_RS06640 (BN1209_1334) | - | 1331159..1332235 (+) | 1077 | WP_045751478.1 | sulfate/molybdate ABC transporter ATP-binding protein | - |
| BN1209_RS06645 (BN1209_1335) | pilA | 1332341..1333324 (+) | 984 | WP_045751479.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| BN1209_RS06650 (BN1209_1336) | - | 1333321..1333986 (+) | 666 | WP_045751480.1 | cell division ATP-binding protein FtsE | - |
| BN1209_RS06655 (BN1209_1337) | ftsX | 1333983..1334891 (+) | 909 | WP_045751481.1 | permease-like cell division protein FtsX | - |
| BN1209_RS06660 (BN1209_1338) | - | 1334940..1335839 (+) | 900 | WP_052661121.1 | hypothetical protein | - |
| BN1209_RS06665 (BN1209_1339) | - | 1335843..1337120 (-) | 1278 | WP_045751482.1 | MFS transporter | - |
| BN1209_RS06670 (BN1209_1340) | rpoH | 1337265..1338125 (+) | 861 | WP_082048421.1 | RNA polymerase sigma factor RpoH | - |
Sequence
Protein
Download Length: 327 a.a. Molecular weight: 34755.84 Da Isoelectric Point: 5.7957
>NTDB_id=1114021 BN1209_RS06645 WP_045751479.1 1332341..1333324(+) (pilA) [Candidatus Methylopumilus turicensis strain MMS-10A-171]
MFDFFKKDKTPEAKTKAEAPAEAASKASWAERLKQGLSRTRSQLGNQLASLFGGGKIDTDVYEELETILLTSDVGISATQ
ALLDDIKQRVARQALSDTSQLKAALKESLMALLAPLEKPLNTSEHQPFVIMLTGVNGAGKTTTIGKLTHLFQAEGKSVLI
AAGDTFRAAAREQLQAWGERNDVHVVASEGGDAAAVIFDAINSAKAKGIDVVLADTAGRLPTQLNLMEEISKVKRVINKA
LPGAPHEVLLVLDANTGQNAVMQVKAFDDALGVTGLVLSKLDGTAKGGVIAAIAQTRPIPVRFIGVGESIEDLRPFKASE
FVEALFE
MFDFFKKDKTPEAKTKAEAPAEAASKASWAERLKQGLSRTRSQLGNQLASLFGGGKIDTDVYEELETILLTSDVGISATQ
ALLDDIKQRVARQALSDTSQLKAALKESLMALLAPLEKPLNTSEHQPFVIMLTGVNGAGKTTTIGKLTHLFQAEGKSVLI
AAGDTFRAAAREQLQAWGERNDVHVVASEGGDAAAVIFDAINSAKAKGIDVVLADTAGRLPTQLNLMEEISKVKRVINKA
LPGAPHEVLLVLDANTGQNAVMQVKAFDDALGVTGLVLSKLDGTAKGGVIAAIAQTRPIPVRFIGVGESIEDLRPFKASE
FVEALFE
Nucleotide
Download Length: 984 bp
>NTDB_id=1114021 BN1209_RS06645 WP_045751479.1 1332341..1333324(+) (pilA) [Candidatus Methylopumilus turicensis strain MMS-10A-171]
ATGTTCGATTTTTTCAAAAAAGACAAAACCCCAGAAGCAAAAACTAAGGCAGAAGCCCCAGCAGAAGCAGCATCAAAAGC
AAGCTGGGCAGAACGTCTTAAACAAGGGTTATCACGCACACGCAGCCAACTAGGCAATCAACTTGCCAGTTTGTTTGGTG
GCGGCAAAATTGATACGGATGTTTACGAGGAACTCGAAACTATCTTACTGACCTCCGACGTTGGCATCTCAGCCACACAA
GCCTTACTCGACGACATTAAACAGCGTGTTGCTCGCCAAGCACTCAGCGACACATCACAGCTCAAAGCGGCGCTTAAAGA
GTCGCTGATGGCTTTATTGGCACCATTAGAAAAACCGCTCAACACTTCAGAACACCAACCCTTTGTGATTATGCTCACTG
GTGTTAACGGCGCAGGCAAAACCACCACCATCGGCAAACTCACCCATTTATTCCAAGCAGAAGGTAAGTCTGTACTGATT
GCCGCTGGCGATACTTTCAGAGCAGCTGCTCGCGAACAGCTCCAAGCTTGGGGAGAGCGTAACGATGTGCATGTGGTGGC
GAGCGAAGGTGGCGATGCTGCAGCAGTGATTTTCGACGCCATCAACTCAGCGAAAGCAAAAGGCATTGACGTTGTGCTGG
CTGACACTGCTGGCCGTTTGCCAACTCAGCTTAATTTGATGGAAGAGATTAGTAAGGTTAAGCGCGTCATCAACAAAGCA
CTACCAGGCGCACCGCATGAAGTACTGCTCGTGCTGGACGCCAACACTGGTCAAAATGCGGTGATGCAAGTCAAAGCCTT
TGACGATGCACTCGGCGTCACAGGATTAGTATTGAGCAAATTAGATGGCACGGCCAAAGGTGGTGTGATTGCCGCGATTG
CGCAAACAAGGCCTATCCCCGTTCGATTCATCGGCGTGGGTGAATCTATTGAAGATTTGCGCCCTTTTAAAGCAAGCGAA
TTTGTAGAGGCATTATTTGAATGA
ATGTTCGATTTTTTCAAAAAAGACAAAACCCCAGAAGCAAAAACTAAGGCAGAAGCCCCAGCAGAAGCAGCATCAAAAGC
AAGCTGGGCAGAACGTCTTAAACAAGGGTTATCACGCACACGCAGCCAACTAGGCAATCAACTTGCCAGTTTGTTTGGTG
GCGGCAAAATTGATACGGATGTTTACGAGGAACTCGAAACTATCTTACTGACCTCCGACGTTGGCATCTCAGCCACACAA
GCCTTACTCGACGACATTAAACAGCGTGTTGCTCGCCAAGCACTCAGCGACACATCACAGCTCAAAGCGGCGCTTAAAGA
GTCGCTGATGGCTTTATTGGCACCATTAGAAAAACCGCTCAACACTTCAGAACACCAACCCTTTGTGATTATGCTCACTG
GTGTTAACGGCGCAGGCAAAACCACCACCATCGGCAAACTCACCCATTTATTCCAAGCAGAAGGTAAGTCTGTACTGATT
GCCGCTGGCGATACTTTCAGAGCAGCTGCTCGCGAACAGCTCCAAGCTTGGGGAGAGCGTAACGATGTGCATGTGGTGGC
GAGCGAAGGTGGCGATGCTGCAGCAGTGATTTTCGACGCCATCAACTCAGCGAAAGCAAAAGGCATTGACGTTGTGCTGG
CTGACACTGCTGGCCGTTTGCCAACTCAGCTTAATTTGATGGAAGAGATTAGTAAGGTTAAGCGCGTCATCAACAAAGCA
CTACCAGGCGCACCGCATGAAGTACTGCTCGTGCTGGACGCCAACACTGGTCAAAATGCGGTGATGCAAGTCAAAGCCTT
TGACGATGCACTCGGCGTCACAGGATTAGTATTGAGCAAATTAGATGGCACGGCCAAAGGTGGTGTGATTGCCGCGATTG
CGCAAACAAGGCCTATCCCCGTTCGATTCATCGGCGTGGGTGAATCTATTGAAGATTTGCGCCCTTTTAAAGCAAGCGAA
TTTGTAGAGGCATTATTTGAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
65.677 |
92.661 |
0.609 |