Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | LHA_RS12525 | Genome accession | NZ_LN681225 |
| Coordinates | 2839758..2840813 (-) | Length | 351 a.a. |
| NCBI ID | WP_045106839.1 | Uniprot ID | A0A0A8UY68 |
| Organism | Legionella hackeliae strain ATCC 35250 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2834758..2845813
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LHA_RS12495 (LHA_2693) | - | 2834786..2835778 (+) | 993 | WP_045106834.1 | ADP-ribosylation factor-like protein | - |
| LHA_RS12500 (LHA_2694) | - | 2835892..2836080 (-) | 189 | WP_045106835.1 | CBU_0585 family protein | - |
| LHA_RS12505 (LHA_2695) | - | 2836180..2837160 (+) | 981 | WP_045106836.1 | adenosine deaminase | - |
| LHA_RS12510 (LHA_2696) | rpoH | 2837266..2838126 (-) | 861 | WP_045106837.1 | RNA polymerase sigma factor RpoH | - |
| LHA_RS12515 (LHA_2697) | ftsX | 2838198..2839127 (-) | 930 | WP_045106838.1 | permease-like cell division protein FtsX | - |
| LHA_RS12520 (LHA_2698) | ftsE | 2839121..2839771 (-) | 651 | WP_045107581.1 | cell division ATP-binding protein FtsE | - |
| LHA_RS12525 (LHA_2699) | pilA | 2839758..2840813 (-) | 1056 | WP_045106839.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| LHA_RS12530 (LHA_2700) | - | 2840875..2842197 (+) | 1323 | WP_045107582.1 | pitrilysin family protein | - |
| LHA_RS12535 (LHA_2701) | - | 2842194..2843498 (+) | 1305 | WP_045106840.1 | pitrilysin family protein | - |
| LHA_RS12540 (LHA_2702) | rsmD | 2843495..2844040 (+) | 546 | WP_045106841.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| LHA_RS12545 (LHA_2703) | dotD | 2844027..2844617 (+) | 591 | WP_231861923.1 | type IVB secretion system lipoprotein DotD | - |
| LHA_RS12550 (LHA_2704) | - | 2844598..2845521 (+) | 924 | WP_045106842.1 | type IV secretion system DotC family protein | - |
Sequence
Protein
Download Length: 351 a.a. Molecular weight: 38225.15 Da Isoelectric Point: 6.8861
>NTDB_id=1113931 LHA_RS12525 WP_045106839.1 2839758..2840813(-) (pilA) [Legionella hackeliae strain ATCC 35250]
MIKWFKRNQDGTESVSKTAEEVITPAEILPPIEAPATETTSKESFFARFKKGLSKTRQQFGEGIGRLLLGKKEIDAALLE
DLETLLLSADLGIETSQSILKQLIDGLARKQLTDGNAVFLTLKKRLEDMLIACEQPLQIETADKSPFVILTVGVNGAGKT
TSIGKMAKQFQQQGKKVMLAAGDTFRAAAVEQLQVWGERNQIPVIAQHTGADSASVIYDALQAAKARGIDILIADTAGRL
HTQGNLMEELKKVKRVMQKLDPKAPHEVMLVLDASIGQNALNQARQFHEAVGLTGIMMTKLDGTAKGGILFAIANELGIP
FRYLGIGEGIDDLRPFNASQFVRAIFNDDQV
MIKWFKRNQDGTESVSKTAEEVITPAEILPPIEAPATETTSKESFFARFKKGLSKTRQQFGEGIGRLLLGKKEIDAALLE
DLETLLLSADLGIETSQSILKQLIDGLARKQLTDGNAVFLTLKKRLEDMLIACEQPLQIETADKSPFVILTVGVNGAGKT
TSIGKMAKQFQQQGKKVMLAAGDTFRAAAVEQLQVWGERNQIPVIAQHTGADSASVIYDALQAAKARGIDILIADTAGRL
HTQGNLMEELKKVKRVMQKLDPKAPHEVMLVLDASIGQNALNQARQFHEAVGLTGIMMTKLDGTAKGGILFAIANELGIP
FRYLGIGEGIDDLRPFNASQFVRAIFNDDQV
Nucleotide
Download Length: 1056 bp
>NTDB_id=1113931 LHA_RS12525 WP_045106839.1 2839758..2840813(-) (pilA) [Legionella hackeliae strain ATCC 35250]
ATGATTAAATGGTTTAAGCGAAATCAAGATGGAACAGAGTCAGTTTCCAAGACGGCTGAAGAGGTTATTACGCCCGCAGA
AATCCTGCCGCCAATAGAAGCTCCTGCCACAGAGACTACATCAAAAGAAAGCTTTTTTGCTCGATTTAAGAAAGGGTTAA
GCAAAACACGGCAGCAGTTTGGTGAGGGTATCGGTCGTTTATTGTTAGGCAAAAAAGAAATCGATGCGGCGCTTCTTGAG
GATCTGGAGACGCTGCTATTAAGTGCCGATTTAGGGATTGAAACTTCACAAAGTATTTTAAAGCAACTAATCGATGGCCT
GGCTAGAAAACAATTAACGGATGGTAATGCTGTTTTCCTGACTCTCAAAAAACGTCTGGAAGACATGCTCATTGCTTGTG
AACAACCGTTACAAATTGAAACAGCGGATAAATCTCCTTTTGTTATTTTGACTGTTGGTGTTAATGGCGCAGGAAAAACT
ACCTCCATTGGTAAAATGGCAAAACAATTTCAGCAGCAAGGGAAGAAAGTTATGTTAGCTGCAGGTGACACCTTTAGAGC
TGCTGCCGTCGAGCAATTACAAGTGTGGGGAGAGCGTAATCAAATTCCCGTGATTGCACAGCATACAGGCGCTGACAGTG
CTTCTGTTATCTATGATGCTTTACAGGCTGCTAAAGCTCGCGGTATAGATATTTTAATCGCTGATACTGCGGGGCGATTA
CATACCCAGGGCAATTTAATGGAAGAACTTAAGAAAGTGAAGCGAGTAATGCAAAAATTGGATCCAAAGGCCCCACATGA
GGTGATGCTCGTTCTCGATGCCAGCATAGGACAAAATGCCCTTAATCAGGCTCGCCAATTCCATGAAGCTGTTGGCTTAA
CTGGAATAATGATGACGAAACTGGATGGCACGGCGAAAGGCGGGATATTGTTTGCAATTGCCAATGAGTTAGGCATACCA
TTTCGTTATCTGGGGATAGGGGAAGGAATTGATGACCTTCGTCCCTTCAATGCATCACAATTTGTTAGAGCAATTTTTAA
TGATGATCAAGTTTGA
ATGATTAAATGGTTTAAGCGAAATCAAGATGGAACAGAGTCAGTTTCCAAGACGGCTGAAGAGGTTATTACGCCCGCAGA
AATCCTGCCGCCAATAGAAGCTCCTGCCACAGAGACTACATCAAAAGAAAGCTTTTTTGCTCGATTTAAGAAAGGGTTAA
GCAAAACACGGCAGCAGTTTGGTGAGGGTATCGGTCGTTTATTGTTAGGCAAAAAAGAAATCGATGCGGCGCTTCTTGAG
GATCTGGAGACGCTGCTATTAAGTGCCGATTTAGGGATTGAAACTTCACAAAGTATTTTAAAGCAACTAATCGATGGCCT
GGCTAGAAAACAATTAACGGATGGTAATGCTGTTTTCCTGACTCTCAAAAAACGTCTGGAAGACATGCTCATTGCTTGTG
AACAACCGTTACAAATTGAAACAGCGGATAAATCTCCTTTTGTTATTTTGACTGTTGGTGTTAATGGCGCAGGAAAAACT
ACCTCCATTGGTAAAATGGCAAAACAATTTCAGCAGCAAGGGAAGAAAGTTATGTTAGCTGCAGGTGACACCTTTAGAGC
TGCTGCCGTCGAGCAATTACAAGTGTGGGGAGAGCGTAATCAAATTCCCGTGATTGCACAGCATACAGGCGCTGACAGTG
CTTCTGTTATCTATGATGCTTTACAGGCTGCTAAAGCTCGCGGTATAGATATTTTAATCGCTGATACTGCGGGGCGATTA
CATACCCAGGGCAATTTAATGGAAGAACTTAAGAAAGTGAAGCGAGTAATGCAAAAATTGGATCCAAAGGCCCCACATGA
GGTGATGCTCGTTCTCGATGCCAGCATAGGACAAAATGCCCTTAATCAGGCTCGCCAATTCCATGAAGCTGTTGGCTTAA
CTGGAATAATGATGACGAAACTGGATGGCACGGCGAAAGGCGGGATATTGTTTGCAATTGCCAATGAGTTAGGCATACCA
TTTCGTTATCTGGGGATAGGGGAAGGAATTGATGACCTTCGTCCCTTCAATGCATCACAATTTGTTAGAGCAATTTTTAA
TGATGATCAAGTTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
53.353 |
97.721 |
0.521 |