Detailed information    

insolico Bioinformatically predicted

Overview

Name   lqsT   Type   Regulator
Locus tag   LHA_RS06985 Genome accession   NZ_LN681225
Coordinates   1558389..1559600 (+) Length   403 a.a.
NCBI ID   WP_231861992.1    Uniprot ID   -
Organism   Legionella hackeliae strain ATCC 35250     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1553389..1564600
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LHA_RS06975 (LHA_1502) - 1554608..1557334 (+) 2727 WP_045105901.1 hypothetical protein -
  LHA_RS06980 (LHA_1503) - 1557466..1558272 (+) 807 WP_045105902.1 hypothetical protein -
  LHA_RS06985 (LHA_1504) lqsT 1558389..1559600 (+) 1212 WP_231861992.1 HAMP domain-containing sensor histidine kinase Regulator
  LHA_RS06990 (LHA_1505) - 1559604..1560278 (-) 675 WP_045105904.1 iron-containing redox enzyme family protein -
  LHA_RS16535 (LHA_1506) - 1560567..1561577 (-) 1011 WP_082060311.1 GNAT family N-acetyltransferase -
  LHA_RS07000 (LHA_1507) - 1561733..1562686 (+) 954 WP_052673630.1 response regulator -
  LHA_RS07005 (LHA_1508) - 1562707..1564074 (-) 1368 WP_045105906.1 hypothetical protein -

Sequence

Protein


Download         Length: 403 a.a.        Molecular weight: 45583.76 Da        Isoelectric Point: 7.7130

>NTDB_id=1113921 LHA_RS06985 WP_231861992.1 1558389..1559600(+) (lqsT) [Legionella hackeliae strain ATCC 35250]
MARQTEEASHQITLFAIVMMINFPLFGVLWKFEVFQLTEEFILRMIATALCALLATNQFWRSSWLKVLPVLWYVTLLFCL
PFFFSYLTLLNHGSTLWLMNCVSAIFFLLLVTSVIGALALLFLGVGFALIGYFYIAGNVAQYIPGNVSLYSLIITFTAAI
IIGALFARDRELLYEGKISGMRLLAGSIAHDLRTPLASIHLQAELQEMLIARLKNHEVRKDLKESLNKITRGIELSNQLI
SMQLSNIQCDKLDTRHFTIMPIKPLLTKAIEEYPLKKGQRNLIHVNLETNFSIWMGEVAFKNLLWNLLKNSVDFIEEMKQ
GEITIWLVTGAEKDDFNYLHFKDTAKGIANPEKIFDTFYSTRKGGTGVGLAYCKSLMLASGGDIVCEGQPGEAHFILKFP
KVD

Nucleotide


Download         Length: 1212 bp        

>NTDB_id=1113921 LHA_RS06985 WP_231861992.1 1558389..1559600(+) (lqsT) [Legionella hackeliae strain ATCC 35250]
TTGGCTAGGCAAACTGAAGAAGCAAGTCATCAAATTACATTATTTGCAATTGTTATGATGATTAATTTTCCACTATTTGG
TGTTTTGTGGAAATTTGAGGTATTTCAATTAACTGAAGAATTTATATTACGAATGATTGCAACGGCACTATGTGCGCTGT
TAGCTACCAATCAGTTTTGGCGATCCTCCTGGCTAAAAGTGCTACCAGTGTTGTGGTATGTCACTTTATTATTTTGTCTT
CCTTTCTTTTTTTCTTACCTTACCTTGCTCAACCATGGTTCTACGCTTTGGCTAATGAATTGTGTCTCAGCTATTTTCTT
TCTTCTCTTGGTAACCAGTGTGATAGGTGCACTCGCTCTTTTATTTTTGGGAGTGGGGTTCGCATTGATTGGCTACTTCT
ATATTGCGGGAAATGTTGCCCAATATATTCCAGGAAACGTGTCACTTTATAGCTTAATTATCACATTTACTGCAGCAATT
ATTATTGGTGCCTTGTTTGCTCGAGACAGGGAGTTGCTTTACGAGGGAAAAATTTCAGGAATGCGCTTGCTTGCTGGCAG
TATAGCGCATGACTTGCGCACACCCCTGGCCAGTATTCATCTCCAGGCTGAACTACAAGAAATGCTCATTGCTCGACTTA
AAAATCATGAGGTAAGAAAGGATTTAAAAGAAAGTCTCAATAAAATCACACGCGGCATTGAATTGAGTAATCAATTAATC
AGCATGCAATTAAGTAATATTCAATGCGATAAATTGGATACGCGCCATTTTACAATCATGCCAATTAAACCGCTGCTAAC
TAAGGCTATTGAAGAATATCCTTTAAAGAAAGGGCAAAGAAATTTAATCCATGTCAATTTAGAAACCAATTTTTCGATTT
GGATGGGAGAAGTAGCGTTTAAAAATCTCTTATGGAATTTATTAAAAAATAGTGTGGATTTTATTGAGGAAATGAAACAA
GGGGAAATAACCATTTGGCTTGTAACGGGTGCCGAAAAGGATGATTTTAATTATCTGCATTTTAAAGATACCGCTAAAGG
GATAGCAAATCCGGAAAAAATTTTTGATACCTTTTATTCAACACGAAAAGGTGGGACTGGTGTAGGATTAGCGTATTGTA
AATCGCTGATGTTGGCCTCAGGAGGAGACATTGTGTGCGAAGGACAACCTGGAGAGGCACATTTTATTCTCAAATTTCCA
AAAGTAGACTAG

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(298-400)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  lqsT Legionella pneumophila subsp. pneumophila str. Philadelphia 1

68.317

100

0.685

Multiple sequence alignment