Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   VV28_RS22780 Genome accession   NZ_LN680001
Coordinates   390865..391005 (+) Length   46 a.a.
NCBI ID   WP_010886404.1    Uniprot ID   A0AAX3RTW8
Organism   Bacillus subtilis strain BS34A     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 385865..396005
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VV28_RS22775 srfAB 387798..390773 (+) 2976 Protein_354 surfactin non-ribosomal peptide synthetase SrfAB -
  VV28_RS22780 comS 390865..391005 (+) 141 WP_010886404.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5244.05 Da        Isoelectric Point: 9.2422

>NTDB_id=1113910 VV28_RS22780 WP_010886404.1 390865..391005(+) (comS) [Bacillus subtilis strain BS34A]
MNRSGKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=1113910 VV28_RS22780 WP_010886404.1 390865..391005(+) (comS) [Bacillus subtilis strain BS34A]
TTGAACCGATCAGGCAAGCATCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment