Detailed information NTG1113833

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: VV28_RS02120
• Genome accession: NZ_LN680001
• Coordinates: 428816..429964 (+)
• Length: 382 a.a.
• NCBI ID: WP_003246686.1
• Uniprot ID: A0AAE2V9H5
• Organism: Bacillus subtilis strain BS34A
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 423816..434964

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VV28_RS02100 (BS34A_04300)	yclH	424193..424873 (-)	681	WP_003234507.1	ABC transporter ATP-binding protein	-
VV28_RS02105 (BS34A_04310)	yclI	424889..426349 (-)	1461	WP_003234506.1	ABC transporter permease	-
VV28_RS02110 (BS34A_04320)	yclJ	426562..427245 (+)	684	WP_003246532.1	two-component system response regulator YclJ	-
VV28_RS02115 (BS34A_04330)	yclK	427232..428653 (+)	1422	WP_009969263.1	two-component system sensor histidine kinase YclK	-
VV28_RS02120 (BS34A_04340)	rapC	428816..429964 (+)	1149	WP_003246686.1	response regulator aspartate phosphatase RapC	Regulator
VV28_RS02125 (BS34A_04350)	phrC	429948..430070 (+)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
VV28_RS21245	yczM	430170..430259 (-)	90	WP_015482794.1	YjcZ family sporulation protein	-
VV28_RS21250 (BS34A_04360)	yczN	430341..430454 (-)	114	WP_003234495.1	YjcZ family sporulation protein	-
VV28_RS02130 (BS34A_04370)	thrD	430608..431972 (-)	1365	WP_009966541.1	aspartate kinase	-
VV28_RS02135 (BS34A_04380)	ceuB	432357..433307 (+)	951	WP_003234491.1	petrobactin ABC transporter permease YclN	Machinery gene
VV28_RS02140 (BS34A_04390)	yclO	433300..434247 (+)	948	WP_003246705.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45634.68 Da
• Isoelectric Point: 4.9618

>NTDB_id=1113833 VV28_RS02120 WP_003246686.1 428816..429964(+) (rapC) [Bacillus subtilis strain BS34A]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYLDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=1113833 VV28_RS02120 WP_003246686.1 428816..429964(+) (rapC) [Bacillus subtilis strain BS34A]
ATGAAGAGTGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAATTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTCTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAGTGCCATTT
CGTCTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAACATGGCCC
AAGCAGAACAAAAAGCCCAGCTGGTTGGAAGAGCATACTACAATCTCGGGTTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACATTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCTGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAGTACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571