Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   VV34_RS04775 Genome accession   NZ_LN649259
Coordinates   925609..926403 (+) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis strain BS49     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 920609..931403
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VV34_RS04745 (BS49_09430) sxzA 921448..922479 (+) 1032 WP_003243057.1 iron ABC transporter permease -
  VV34_RS04750 (BS49_09440) yfhB 922594..923475 (+) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  VV34_RS04755 (BS49_09450) yfhC 923563..924147 (+) 585 WP_003243940.1 nitroreductase -
  VV34_RS04760 (BS49_09460) yfhD 924186..924377 (-) 192 WP_003233561.1 YfhD family protein -
  VV34_RS22570 (BS49_09470) yfhE 924444..924554 (-) 111 WP_003223230.1 YfhE family protein -
  VV34_RS04770 (BS49_09480) yfhF 924609..925520 (-) 912 WP_003244332.1 TIGR01777 family oxidoreductase -
  VV34_RS04775 (BS49_09490) recX 925609..926403 (+) 795 WP_003243354.1 recombination regulator RecX Regulator
  VV34_RS04780 (BS49_09500) yfhH 926405..926719 (+) 315 WP_003244592.1 YfhH family protein -
  VV34_RS04790 (BS49_09520) yfhI 926862..928055 (+) 1194 WP_003243500.1 MFS transporter -
  VV34_RS04795 (BS49_09530) sspK 928088..928240 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  VV34_RS04800 (BS49_09540) yfhJ 928365..928634 (+) 270 WP_003243789.1 YfhJ family protein -
  VV34_RS04805 (BS49_09550) yfhK 928779..929297 (+) 519 WP_003243363.1 SH3 domain-containing protein -
  VV34_RS04810 (BS49_09560) spdL 929382..929714 (+) 333 WP_003242803.1 SdpC immunity protein SpdL -
  VV34_RS04815 (BS49_09570) ephM 929701..930561 (+) 861 WP_003243419.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=1113756 VV34_RS04775 WP_003243354.1 925609..926403(+) (recX) [Bacillus subtilis strain BS49]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=1113756 VV34_RS04775 WP_003243354.1 925609..926403(+) (recX) [Bacillus subtilis strain BS49]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGATCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment