Detailed information
Bioinformatically predicted
Overview
| Name | nin/comJ | Type | Regulator |
| Locus tag | VV34_RS02000 | Genome accession | NZ_LN649259 |
| Coordinates | 371715..372113 (-) | Length | 132 a.a. |
| NCBI ID | WP_003246342.1 | Uniprot ID | A0AAE2SGH7 |
| Organism | Bacillus subtilis strain BS49 | ||
| Function | represses the expression of nucA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 366715..377113
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VV34_RS01970 (BS49_03920) | yckA | 367291..367971 (-) | 681 | WP_003234624.1 | amino acid ABC transporter permease | - |
| VV34_RS01975 (BS49_03930) | yckB | 367981..368844 (-) | 864 | WP_009966510.1 | transporter substrate-binding domain-containing protein | - |
| VV34_RS23505 | - | 369006..369203 (+) | 198 | WP_119122841.1 | hypothetical protein | - |
| VV34_RS01985 (BS49_03960) | yckC | 369222..369677 (+) | 456 | WP_003246356.1 | RDD family protein | - |
| VV34_RS01990 (BS49_03970) | yckD | 369759..370091 (+) | 333 | WP_003246247.1 | YckD family protein | - |
| VV34_RS01995 (BS49_03980) | bglC | 370245..371678 (+) | 1434 | WP_003246242.1 | 6-phospho-beta-glucosidase | - |
| VV34_RS02000 (BS49_03990) | nin/comJ | 371715..372113 (-) | 399 | WP_003246342.1 | DNA-entry nuclease inhibitor | Regulator |
| VV34_RS02005 (BS49_04000) | nucA/comI | 372140..372589 (-) | 450 | WP_003246436.1 | DNA-entry nuclease | Machinery gene |
| VV34_RS02010 (BS49_04010) | tlpC | 372757..374478 (-) | 1722 | WP_003246498.1 | methyl-accepting chemotaxis protein TlpC | - |
| VV34_RS02015 (BS49_04020) | hxlB | 374589..375146 (-) | 558 | WP_003246343.1 | 6-phospho-3-hexuloisomerase | - |
| VV34_RS02020 (BS49_04030) | hxlA | 375152..375784 (-) | 633 | WP_003246452.1 | 3-hexulose-6-phosphate synthase | - |
| VV34_RS02025 (BS49_04040) | hxlR | 376017..376379 (+) | 363 | WP_003246265.1 | transcriptional activator HxlR | - |
Sequence
Protein
Download Length: 132 a.a. Molecular weight: 14996.95 Da Isoelectric Point: 4.8991
>NTDB_id=1113745 VV34_RS02000 WP_003246342.1 371715..372113(-) (nin/comJ) [Bacillus subtilis strain BS49]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILFRLNSSETVNSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILFRLNSSETVNSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV
Nucleotide
Download Length: 399 bp
>NTDB_id=1113745 VV34_RS02000 WP_003246342.1 371715..372113(-) (nin/comJ) [Bacillus subtilis strain BS49]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTTCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTTCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nin/comJ | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |