Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | SRS_RS08240 | Genome accession | NZ_LN626917 |
| Coordinates | 1635459..1635758 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain ILRI_Eymole1/1 isolate Staphylococcus aureus isolate ILRI_Eymole1/1 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1630459..1640758
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SRS_RS08215 | gcvPA | 1631671..1633017 (-) | 1347 | WP_045179189.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| SRS_RS08220 | gcvT | 1633037..1634128 (-) | 1092 | WP_045179191.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| SRS_RS08225 | - | 1634287..1634811 (-) | 525 | WP_001015125.1 | shikimate kinase | - |
| SRS_RS08230 | - | 1634801..1634947 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| SRS_RS08235 | comGF | 1635044..1635541 (-) | 498 | WP_001794328.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| SRS_RS08240 | comGE | 1635459..1635758 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| SRS_RS08245 | comGD | 1635745..1636191 (-) | 447 | WP_001791207.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| SRS_RS08250 | comGC | 1636169..1636480 (-) | 312 | WP_000472257.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| SRS_RS08255 | comGB | 1636494..1637564 (-) | 1071 | WP_000776412.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| SRS_RS08260 | comGA | 1637536..1638510 (-) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| SRS_RS08265 | - | 1638562..1639185 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| SRS_RS08270 | - | 1639182..1639511 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| SRS_RS08275 | - | 1639511..1640497 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| SRS_RS08280 | - | 1640494..1640697 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=1113685 SRS_RS08240 WP_000844413.1 1635459..1635758(-) (comGE) [Staphylococcus aureus strain ILRI_Eymole1/1 isolate Staphylococcus aureus isolate ILRI_Eymole1/1]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=1113685 SRS_RS08240 WP_000844413.1 1635459..1635758(-) (comGE) [Staphylococcus aureus strain ILRI_Eymole1/1 isolate Staphylococcus aureus isolate ILRI_Eymole1/1]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |