Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | BN1079_RS15090 | Genome accession | NZ_CCSF01000001 |
| Coordinates | 3244693..3245223 (-) | Length | 176 a.a. |
| NCBI ID | WP_037025888.1 | Uniprot ID | A0A078M111 |
| Organism | Pseudomonas saudiphocaensis strain 20_BN | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3239693..3250223
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BN1079_RS17900 (BN1079_03093) | - | 3243309..3243878 (-) | 570 | WP_052114494.1 | PilX N-terminal domain-containing pilus assembly protein | - |
| BN1079_RS15085 (BN1079_03094) | - | 3243875..3244690 (-) | 816 | WP_037025886.1 | PilW family protein | - |
| BN1079_RS15090 (BN1079_03095) | pilV | 3244693..3245223 (-) | 531 | WP_037025888.1 | type IV pilus modification protein PilV | Machinery gene |
| BN1079_RS15095 (BN1079_03096) | - | 3245226..3245639 (-) | 414 | WP_052114495.1 | Tfp pilus assembly protein FimT/FimU | - |
| BN1079_RS17465 (BN1079_03097) | - | 3245823..3246323 (-) | 501 | WP_074436862.1 | GspH/FimT family pseudopilin | - |
| BN1079_RS15105 (BN1079_03098) | thiO | 3246452..3247549 (+) | 1098 | WP_037025893.1 | glycine oxidase ThiO | - |
| BN1079_RS15110 (BN1079_03099) | - | 3248006..3248377 (+) | 372 | WP_037025895.1 | translation initiation factor Sui1 | - |
Sequence
Protein
Download Length: 176 a.a. Molecular weight: 18927.36 Da Isoelectric Point: 4.2821
>NTDB_id=111359 BN1079_RS15090 WP_037025888.1 3244693..3245223(-) (pilV) [Pseudomonas saudiphocaensis strain 20_BN]
MNRAHGIRGFSMIEVLVTILLICIGVLGLVALQGRTIAYTQDSALRNTAAMLADDLQELMRADLDKVIADGLPRSSSDYY
KAKNADFPDPADDCTSLASASAPERLGCWAEKAKATLPGADDLMNSAFHICHTKTSGDCDGDGSTIEIQLAWAVKGGECL
DDSENEYCTYAVRVEF
MNRAHGIRGFSMIEVLVTILLICIGVLGLVALQGRTIAYTQDSALRNTAAMLADDLQELMRADLDKVIADGLPRSSSDYY
KAKNADFPDPADDCTSLASASAPERLGCWAEKAKATLPGADDLMNSAFHICHTKTSGDCDGDGSTIEIQLAWAVKGGECL
DDSENEYCTYAVRVEF
Nucleotide
Download Length: 531 bp
>NTDB_id=111359 BN1079_RS15090 WP_037025888.1 3244693..3245223(-) (pilV) [Pseudomonas saudiphocaensis strain 20_BN]
ATGAACAGAGCACACGGCATCCGCGGCTTCAGCATGATCGAAGTCCTCGTCACCATTCTGCTGATCTGTATCGGCGTACT
GGGTTTGGTCGCTCTGCAAGGACGAACCATCGCCTATACCCAGGACTCCGCCCTACGCAACACCGCCGCCATGCTCGCCG
ACGACCTGCAGGAGCTGATGCGGGCCGACCTCGACAAGGTAATCGCCGATGGCCTGCCGCGGAGCTCATCCGACTATTAC
AAGGCCAAGAATGCGGATTTTCCTGACCCAGCGGACGACTGTACGTCGCTCGCTAGCGCGAGCGCCCCGGAGCGGCTTGG
CTGCTGGGCGGAAAAAGCCAAAGCGACCTTACCGGGTGCGGATGACCTAATGAACAGCGCTTTTCACATTTGCCATACCA
AAACCTCTGGCGATTGCGATGGGGATGGTTCCACCATCGAAATCCAGCTCGCTTGGGCGGTCAAGGGCGGGGAATGCCTA
GATGATAGCGAGAATGAATATTGCACCTACGCCGTGCGAGTGGAGTTTTAA
ATGAACAGAGCACACGGCATCCGCGGCTTCAGCATGATCGAAGTCCTCGTCACCATTCTGCTGATCTGTATCGGCGTACT
GGGTTTGGTCGCTCTGCAAGGACGAACCATCGCCTATACCCAGGACTCCGCCCTACGCAACACCGCCGCCATGCTCGCCG
ACGACCTGCAGGAGCTGATGCGGGCCGACCTCGACAAGGTAATCGCCGATGGCCTGCCGCGGAGCTCATCCGACTATTAC
AAGGCCAAGAATGCGGATTTTCCTGACCCAGCGGACGACTGTACGTCGCTCGCTAGCGCGAGCGCCCCGGAGCGGCTTGG
CTGCTGGGCGGAAAAAGCCAAAGCGACCTTACCGGGTGCGGATGACCTAATGAACAGCGCTTTTCACATTTGCCATACCA
AAACCTCTGGCGATTGCGATGGGGATGGTTCCACCATCGAAATCCAGCTCGCTTGGGCGGTCAAGGGCGGGGAATGCCTA
GATGATAGCGAGAATGAATATTGCACCTACGCCGTGCGAGTGGAGTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
48.333 |
100 |
0.494 |