Detailed information NTG1113381

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ACNRMP_RS13240
• Genome accession: NZ_JBLWDC010000001
• Coordinates: 2856744..2857877 (-)
• Length: 377 a.a.
• NCBI ID: WP_021155989.1
• Uniprot ID: -
• Organism: Ralstonia pseudosolanacearum strain PD 7123
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2851744..2862877

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACNRMP_RS13215 (ACNRMP_13215)	-	2852444..2853706 (-)	1263	WP_019717482.1	CmpA/NrtA family ABC transporter substrate-binding protein	-
ACNRMP_RS13220 (ACNRMP_13220)	-	2853983..2854609 (-)	627	WP_038938076.1	ANTAR domain-containing response regulator	-
ACNRMP_RS13225 (ACNRMP_13225)	-	2854757..2855458 (+)	702	WP_011000346.1	fumarylacetoacetate hydrolase family protein	-
ACNRMP_RS13230 (ACNRMP_13230)	maiA	2855462..2856112 (+)	651	WP_016724252.1	maleylacetoacetate isomerase	-
ACNRMP_RS13235 (ACNRMP_13235)	-	2856109..2856747 (+)	639	WP_011000348.1	LysE/ArgO family amino acid transporter	-
ACNRMP_RS13240 (ACNRMP_13240)	pilA	2856744..2857877 (-)	1134	WP_021155989.1	signal recognition particle-docking protein FtsY	Machinery gene
ACNRMP_RS13245 (ACNRMP_13245)	-	2857938..2859449 (+)	1512	WP_028852563.1	M16 family metallopeptidase	-
ACNRMP_RS13250 (ACNRMP_13250)	-	2859449..2860792 (+)	1344	WP_028852564.1	M16 family metallopeptidase	-
ACNRMP_RS13255 (ACNRMP_13255)	rsmD	2860873..2861520 (+)	648	WP_016724254.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ACNRMP_RS13260 (ACNRMP_13260)	coaD	2861716..2862222 (+)	507	WP_003262550.1	pantetheine-phosphate adenylyltransferase	-
ACNRMP_RS13265 (ACNRMP_13265)	-	2862273..2862521 (+)	249	WP_011000353.1	YfhL family 4Fe-4S dicluster ferredoxin	-

Sequence

Protein

• Length: 377 a.a.
• Molecular weight: 40003.20 Da
• Isoelectric Point: 5.8101

>NTDB_id=1113381 ACNRMP_RS13240 WP_021155989.1 2856744..2857877(-) (pilA) [Ralstonia pseudosolanacearum strain PD 7123]
MFSFWKKRKAEPQPAAEPAPPAAAPEAAQAPAPAPVATPVPTPAPAPVAVPDTPAAPAALDMQADDIETVPTPPVVEQAR
KGWMSRLRSGLSKTSKSLTTLFVGVKVDEALFEELETALLMADAGVDATEYLLDELRRRVKAQRIETAEGVKTALRDLLI
ELLHPLEKTMVLGRDQPTVIMIAGVNGAGKTTSIGKLCKHFQTYGQSVLLAAGDTFRAAAREQLVIWGQRNNVTVVAQES
GDPAAVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVRRVIGKAMATAPHETLLVIDANTGQNALAQVKAFDDA
LGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEQVEDLQPFSAREFADALLG

Nucleotide

• Length: 1134 bp

>NTDB_id=1113381 ACNRMP_RS13240 WP_021155989.1 2856744..2857877(-) (pilA) [Ralstonia pseudosolanacearum strain PD 7123]
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCAGAGCCCCAGCCGGCTGCCGAACCGGCGCCGCCCGCCGCCGCGCCCGAAGC
CGCACAGGCTCCTGCCCCGGCCCCGGTTGCCACCCCCGTCCCCACGCCGGCCCCCGCCCCGGTCGCCGTGCCGGATACGC
CGGCCGCGCCGGCTGCACTGGACATGCAGGCCGATGACATCGAGACCGTGCCGACGCCGCCCGTGGTGGAGCAGGCGCGC
AAAGGCTGGATGTCGCGCCTGCGCTCGGGCCTGTCGAAGACCAGCAAGAGCCTGACCACGCTGTTCGTCGGCGTGAAGGT
GGACGAGGCGCTGTTCGAGGAGCTGGAGACCGCGCTGCTGATGGCCGATGCCGGCGTCGATGCCACCGAGTACCTGCTGG
ACGAACTGCGCCGCCGCGTGAAGGCCCAGCGCATCGAGACCGCCGAGGGCGTGAAGACCGCGCTGCGCGACCTGCTCATC
GAGCTGCTGCATCCGCTCGAAAAGACCATGGTGCTCGGCCGCGACCAGCCGACGGTGATCATGATCGCGGGCGTCAACGG
TGCCGGCAAGACCACCAGCATCGGCAAGCTGTGCAAGCACTTCCAGACCTATGGACAGTCCGTGCTGCTGGCCGCCGGCG
ACACCTTCCGCGCCGCCGCGCGCGAGCAGCTGGTGATCTGGGGCCAGCGCAACAACGTGACCGTGGTGGCGCAGGAATCG
GGCGACCCGGCCGCCGTGATCTTCGACGCGGTGAACGCGGCGCGCGCCCGCGGCATCGACATCGTCATGGCCGACACCGC
CGGCCGCCTGCCGACCCAGCTGCACCTGATGGAAGAGCTGAAGAAGGTGCGCCGCGTGATCGGCAAAGCGATGGCGACCG
CGCCGCACGAGACCCTGCTGGTGATCGACGCCAACACCGGCCAGAACGCGCTGGCGCAGGTGAAAGCCTTCGACGATGCG
CTCGGCCTGACCGGCCTGATCGTCACCAAGCTGGACGGCACCGCCAAGGGCGGCATCCTGGCCGCCATCGCGCGGCAGCG
GCCGGTGCCGGTATATTTCATCGGCGTGGGCGAGCAGGTGGAAGACCTGCAGCCGTTCTCCGCGCGCGAATTCGCCGACG
CGCTGCTGGGCTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (177-377)

• SRP54-type protein, helical bundle domain (SRP54_N) (96-157)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	52.163	100	0.576