Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ACK8OV_RS09460 Genome accession   NZ_JBKHUK010000001
Coordinates   1875517..1876143 (-) Length   208 a.a.
NCBI ID   WP_032637053.1    Uniprot ID   A0AAJ6MNH4
Organism   Enterobacter kobei strain L5089hy     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1870517..1881143
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACK8OV_RS09445 (ACK8OV_09445) helD 1870754..1872808 (-) 2055 WP_045281285.1 DNA helicase IV -
  ACK8OV_RS09450 (ACK8OV_09450) - 1872932..1873378 (+) 447 WP_014883256.1 YccF domain-containing protein -
  ACK8OV_RS09455 (ACK8OV_09455) yccS 1873398..1875560 (+) 2163 WP_023332614.1 YccS family putative transporter -
  ACK8OV_RS09460 (ACK8OV_09460) sxy/tfoX 1875517..1876143 (-) 627 WP_032637053.1 TfoX/Sxy family DNA transformation protein Regulator
  ACK8OV_RS09465 (ACK8OV_09465) sulA 1876361..1876870 (+) 510 WP_014883253.1 SOS-induced cell division inhibitor SulA -
  ACK8OV_RS09470 (ACK8OV_09470) ompA 1877226..1878281 (+) 1056 WP_014883252.1 porin OmpA -
  ACK8OV_RS09475 (ACK8OV_09475) matP 1878346..1878798 (-) 453 WP_023332611.1 macrodomain Ter protein MatP -
  ACK8OV_RS09480 (ACK8OV_09480) - 1878985..1880745 (+) 1761 WP_014883250.1 Lon protease family protein -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23930.53 Da        Isoelectric Point: 9.0691

>NTDB_id=1113348 ACK8OV_RS09460 WP_032637053.1 1875517..1876143(-) (sxy/tfoX) [Enterobacter kobei strain L5089hy]
MKKISYERIYQSQEYLSPLGEIHHRALFGGYTLAIDDAVFAMVSDGELYLRACEESAKYCVKNAASFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALNAARKERCQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARECWLKMRAKN
RALGIKVLFALEGAIEGLHEAALPAGTRRELTEWFNALPEPQKNHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=1113348 ACK8OV_RS09460 WP_032637053.1 1875517..1876143(-) (sxy/tfoX) [Enterobacter kobei strain L5089hy]
ATGAAAAAGATATCTTATGAACGGATTTATCAATCCCAGGAATACCTCTCACCGCTAGGAGAAATTCATCATCGCGCACT
GTTCGGTGGCTATACCCTGGCGATAGATGACGCGGTTTTTGCCATGGTGTCAGATGGCGAGCTGTACCTTCGCGCCTGTG
AAGAAAGCGCGAAATACTGTGTAAAAAATGCCGCCTCCTTTTTGACGCTGATGAAACGAGGCCGCCCGGTACTTCTCAAC
TATTACCGTGTCGATGATGGACTGTGGCAAGACAGGGAACGGCTGCTTCAGCTCTCCTCTTTCGCGCTCAATGCGGCGAG
GAAAGAGCGCTGTCAGCGCCATCAACGAAACCGGCTTAAAGATCTGCCAAACCTGACCTTTCAGCTTGAGGTATTACTTT
TTGAAGCTGGCATTACTAACGAAGAGACGCTGCGGGCACTGGGTGCCAGGGAGTGCTGGTTAAAGATGCGGGCTAAAAAT
AGGGCACTCGGTATTAAAGTGCTCTTCGCCCTTGAGGGGGCTATTGAGGGTTTGCATGAGGCGGCACTCCCGGCAGGCAC
TCGCCGGGAGTTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGAAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

57.143

97.596

0.558

Multiple sequence alignment