Detailed information NTG1113050

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: MWH27_RS20075
• Genome accession: NZ_JALJVV010000001
• Coordinates: 3732558..3733703 (+)
• Length: 381 a.a.
• NCBI ID: WP_014481226.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain A-5
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3727558..3738703

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MWH27_RS20055 (MWH27_20000)	albF	3727574..3728854 (+)	1281	WP_014481221.1	pitrilysin family protein	-
MWH27_RS20060 (MWH27_20005)	albG	3728851..3729552 (+)	702	WP_014481222.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
MWH27_RS20065 (MWH27_20010)	ywhL	3729558..3730934 (-)	1377	WP_014481223.1	YncE family protein	-
MWH27_RS20070 (MWH27_20015)	ywhK	3730973..3732328 (-)	1356	WP_014481224.1	YncE family protein	-
MWH27_RS22570	-	3732325..3732555 (-)	231	Protein_3888	hypothetical protein	-
MWH27_RS20075 (MWH27_20020)	rapF	3732558..3733703 (+)	1146	WP_014481226.1	response regulator aspartate phosphatase RapF	Regulator
MWH27_RS20080 (MWH27_20025)	phrF	3733687..3733806 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
MWH27_RS20085 (MWH27_20030)	-	3733904..3734331 (+)	428	Protein_3891	YbaK/EbsC family protein	-
MWH27_RS20090 (MWH27_20035)	speB	3734396..3735268 (-)	873	WP_003227545.1	agmatinase	-
MWH27_RS20095 (MWH27_20040)	speE	3735329..3736159 (-)	831	WP_003227543.1	spermidine synthase	-
MWH27_RS20100 (MWH27_20045)	pbpG	3736361..3738436 (+)	2076	WP_014481227.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45627.12 Da
• Isoelectric Point: 5.1503

>NTDB_id=1113050 MWH27_RS20075 WP_014481226.1 3732558..3733703(+) (rapF) [Bacillus subtilis strain A-5]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=1113050 MWH27_RS20075 WP_014481226.1 3732558..3733703(+) (rapF) [Bacillus subtilis strain A-5]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTACGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.738	100	0.997
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572