Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   K2J19_RS02930 Genome accession   NZ_JAIEUD010000001
Coordinates   596916..597542 (-) Length   208 a.a.
NCBI ID   WP_017384804.1    Uniprot ID   A0AA37AJW2
Organism   Enterobacter hormaechei strain ECC47     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 591916..602542
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K2J19_RS02915 (K2J19_02915) helD 592155..594209 (-) 2055 WP_023296275.1 DNA helicase IV -
  K2J19_RS02920 (K2J19_02920) - 594332..594778 (+) 447 WP_003858149.1 YccF domain-containing protein -
  K2J19_RS02925 (K2J19_02925) yccS 594797..596959 (+) 2163 WP_015570895.1 YccS family putative transporter -
  K2J19_RS02930 (K2J19_02930) sxy/tfoX 596916..597542 (-) 627 WP_017384804.1 TfoX/Sxy family DNA transformation protein Regulator
  K2J19_RS02935 (K2J19_02935) sulA 597760..598269 (+) 510 WP_032104231.1 SOS-induced cell division inhibitor SulA -
  K2J19_RS02940 (K2J19_02940) ompA 598626..599678 (+) 1053 WP_017694761.1 porin OmpA -
  K2J19_RS02945 (K2J19_02945) matP 599744..600196 (-) 453 WP_006809347.1 macrodomain Ter protein MatP -
  K2J19_RS02950 (K2J19_02950) - 600383..602143 (+) 1761 WP_032647912.1 Lon protease family protein -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24018.63 Da        Isoelectric Point: 9.4592

>NTDB_id=1112862 K2J19_RS02930 WP_017384804.1 596916..597542(-) (sxy/tfoX) [Enterobacter hormaechei strain ECC47]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELMEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=1112862 K2J19_RS02930 WP_017384804.1 596916..597542(-) (sxy/tfoX) [Enterobacter hormaechei strain ECC47]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCCTCTTTTCTGACACTGATGAAACGAGGACGGCCAGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAGCTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAATCGGCTTAAGGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCCATCGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTATGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572

Multiple sequence alignment