Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   KHO07_RS01755 Genome accession   NZ_HG995459
Coordinates   381881..382285 (+) Length   134 a.a.
NCBI ID   WP_056854372.1    Uniprot ID   -
Organism   Pseudomonas sp. PP3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 376881..387285
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KHO07_RS01725 - 376993..377997 (-) 1005 WP_020797380.1 aspartate carbamoyltransferase catalytic subunit -
  KHO07_RS01730 pyrR 378025..378528 (-) 504 WP_150734163.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  KHO07_RS01735 ruvX 378623..379060 (-) 438 WP_150734164.1 Holliday junction resolvase RuvX -
  KHO07_RS01740 - 379060..379632 (-) 573 WP_150734165.1 YqgE/AlgH family protein -
  KHO07_RS01745 - 379728..380627 (-) 900 WP_212626327.1 energy transducer TonB -
  KHO07_RS01750 gshB 380692..381645 (-) 954 WP_150734167.1 glutathione synthase -
  KHO07_RS01755 pilG 381881..382285 (+) 405 WP_056854372.1 twitching motility response regulator PilG Regulator
  KHO07_RS01760 pilH 382343..382708 (+) 366 WP_075946300.1 twitching motility response regulator PilH -
  KHO07_RS01765 - 382719..383258 (+) 540 WP_150734168.1 chemotaxis protein CheW -
  KHO07_RS01770 - 383373..385406 (+) 2034 WP_224791264.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14600.03 Da        Isoelectric Point: 7.2441

>NTDB_id=1112601 KHO07_RS01755 WP_056854372.1 381881..382285(+) (pilG) [Pseudomonas sp. PP3]
MEQHPSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIADNHPGIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLNAIQAHVPGFAAVLPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=1112601 KHO07_RS01755 WP_056854372.1 381881..382285(+) (pilG) [Pseudomonas sp. PP3]
ATGGAACAGCACCCCAGCGCCTTGAAGGTCATGGTGATCGATGATTCGAAGACGATTCGCCGCACCGCCGAAACGCTGTT
GAAAAACGTGGGTTGTGAGGTCATCACGGCCATCGACGGTTTCGATGCCCTGGCCAAGATCGCCGACAATCATCCCGGCA
TCATCTTTGTCGACATCATGATGCCGCGTCTGGATGGCTATCAGACCTGCGCTTTAATCAAGAACAACAGTGCGTTCAAG
TCCACGCCAGTGATAATGCTGTCGTCCAAGGACGGGCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTT
TTTGACCAAACCTTTCAGCAAGGAAGAACTGCTGAACGCGATCCAGGCCCACGTTCCGGGCTTCGCCGCCGTTTTGCCGC
AGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

93.284

0.709

Multiple sequence alignment