Detailed information
Bioinformatically predicted
Overview
| Name | luxP | Type | Regulator |
| Locus tag | KHN94_RS15500 | Genome accession | NZ_HG992759 |
| Coordinates | 124346..125443 (+) | Length | 365 a.a. |
| NCBI ID | WP_182030867.1 | Uniprot ID | - |
| Organism | Vibrio sp. B1FLJ16 isolate B1REV17 | ||
| Function | autoinducer sensor (predicted from homology) Competence regulation |
||
Genomic Context
Location: 119346..130443
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KHN94_RS15465 (ACOMICROBIO_EPCKBFOG_03157) | - | 119916..120161 (-) | 246 | WP_182010727.1 | hypothetical protein | - |
| KHN94_RS15470 (ACOMICROBIO_LOCUS3137) | - | 120321..120806 (-) | 486 | WP_182010726.1 | acyl-CoA thioesterase | - |
| KHN94_RS15475 (ACOMICROBIO_LOCUS3138) | - | 121290..122174 (+) | 885 | WP_182010725.1 | DMT family transporter | - |
| KHN94_RS15480 (ACOMICROBIO_EPCKBFOG_03160) | - | 122340..122654 (-) | 315 | WP_182010724.1 | DUF496 family protein | - |
| KHN94_RS15485 (ACOMICROBIO_EPCKBFOG_03161) | - | 122872..123087 (+) | 216 | WP_182010761.1 | hypothetical protein | - |
| KHN94_RS15490 (ACOMICROBIO_EPCKBFOG_03162) | - | 123179..123826 (+) | 648 | WP_182030863.1 | YceH family protein | - |
| KHN94_RS15495 (ACOMICROBIO_LOCUS3139) | - | 123823..124134 (+) | 312 | WP_182030865.1 | GIY-YIG nuclease family protein | - |
| KHN94_RS15500 (ACOMICROBIO_LOCUS3140) | luxP | 124346..125443 (+) | 1098 | WP_182030867.1 | autoinducer 2-binding periplasmic protein LuxP | Regulator |
| KHN94_RS15505 (ACOMICROBIO_LOCUS3141) | luxQ | 125443..128010 (+) | 2568 | WP_182030869.1 | quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ | - |
| KHN94_RS15510 (ACOMICROBIO_LOCUS3142) | - | 128222..128677 (+) | 456 | WP_182030871.1 | MarR family transcriptional regulator | - |
| KHN94_RS15515 (ACOMICROBIO_LOCUS3143) | - | 128711..129769 (+) | 1059 | WP_182030873.1 | HlyD family secretion protein | - |
Sequence
Protein
Download Length: 365 a.a. Molecular weight: 41552.03 Da Isoelectric Point: 5.5134
>NTDB_id=1112549 KHN94_RS15500 WP_182030867.1 124346..125443(+) (luxP) [Vibrio sp. B1FLJ16 isolate B1REV17]
MKKTFVSSLILMAGIAPASNASQVLNGYWEYQEFLDEFPQQQKLTDALAVAVREKPAPILPEKKRELKISVVYPGQQISD
YWIRNIDAFEKRLDKLNIDYQLNQVFTRPNADIKQQSLSLMEALKSKSDYLIFTLDTTRHRKFIEHVLDSKKTKLILQNI
TTPVRGWEQHQPFLYVGFDHAEGSRKLATEFSQRFPKHSRYSVLYFSEGYISDVRGNTFIHKVNQDSNFELQSAYYTKAT
KQSGYEAAKASLEKYPDVEFIYACSTDVALGAVEALEELGRDDIMINGWGGGSAELDAILNGEIDITVMRMNDDTGIAMA
EAIKWDLEGKSVPIVYSGDYEVVTTSDSPERIQALKKRAFRYSDN
MKKTFVSSLILMAGIAPASNASQVLNGYWEYQEFLDEFPQQQKLTDALAVAVREKPAPILPEKKRELKISVVYPGQQISD
YWIRNIDAFEKRLDKLNIDYQLNQVFTRPNADIKQQSLSLMEALKSKSDYLIFTLDTTRHRKFIEHVLDSKKTKLILQNI
TTPVRGWEQHQPFLYVGFDHAEGSRKLATEFSQRFPKHSRYSVLYFSEGYISDVRGNTFIHKVNQDSNFELQSAYYTKAT
KQSGYEAAKASLEKYPDVEFIYACSTDVALGAVEALEELGRDDIMINGWGGGSAELDAILNGEIDITVMRMNDDTGIAMA
EAIKWDLEGKSVPIVYSGDYEVVTTSDSPERIQALKKRAFRYSDN
Nucleotide
Download Length: 1098 bp
>NTDB_id=1112549 KHN94_RS15500 WP_182030867.1 124346..125443(+) (luxP) [Vibrio sp. B1FLJ16 isolate B1REV17]
ATGAAAAAAACATTCGTATCCTCCCTTATTTTAATGGCCGGTATTGCCCCAGCTTCAAATGCTTCCCAAGTCCTGAACGG
ATATTGGGAGTATCAGGAATTTTTGGATGAGTTTCCCCAGCAGCAGAAACTCACCGACGCACTTGCTGTCGCTGTTCGTG
AAAAACCTGCTCCGATTTTGCCGGAGAAAAAGCGTGAACTAAAGATTTCGGTTGTTTACCCGGGCCAGCAGATATCTGAT
TACTGGATCAGAAATATTGATGCATTTGAAAAGCGCTTAGATAAACTGAATATAGATTATCAGTTAAATCAGGTCTTCAC
CCGACCGAACGCGGATATCAAGCAACAAAGCCTTTCCCTCATGGAAGCTCTTAAAAGTAAATCGGACTATCTTATCTTTA
CTCTTGATACAACGAGACATCGTAAATTTATCGAGCACGTACTGGATTCAAAGAAGACCAAACTCATCTTACAGAACATC
ACTACCCCAGTAAGAGGTTGGGAGCAACATCAGCCGTTTCTCTACGTCGGTTTTGATCATGCAGAGGGCAGCCGGAAGTT
GGCGACAGAGTTTAGTCAGCGTTTTCCAAAACACAGCCGTTACAGTGTTCTTTATTTTTCTGAGGGATACATTAGTGATG
TGCGTGGTAACACCTTTATTCATAAGGTGAATCAGGACAGTAATTTTGAACTGCAATCTGCTTATTACACTAAGGCAACG
AAGCAGTCAGGCTATGAAGCGGCGAAAGCGAGTCTCGAAAAATACCCTGATGTAGAGTTCATTTATGCCTGCTCAACAGA
TGTCGCATTAGGTGCGGTAGAAGCACTAGAGGAACTTGGCCGTGATGATATTATGATTAACGGCTGGGGAGGAGGCTCTG
CTGAGCTTGATGCTATTCTGAATGGAGAAATAGATATTACCGTTATGCGAATGAACGATGATACTGGCATCGCAATGGCA
GAGGCTATCAAGTGGGATTTAGAAGGGAAGTCAGTACCGATCGTATATTCTGGCGATTATGAAGTCGTGACGACATCCGA
TTCTCCGGAAAGAATACAAGCTTTAAAAAAGCGCGCATTTAGATACTCAGATAATTGA
ATGAAAAAAACATTCGTATCCTCCCTTATTTTAATGGCCGGTATTGCCCCAGCTTCAAATGCTTCCCAAGTCCTGAACGG
ATATTGGGAGTATCAGGAATTTTTGGATGAGTTTCCCCAGCAGCAGAAACTCACCGACGCACTTGCTGTCGCTGTTCGTG
AAAAACCTGCTCCGATTTTGCCGGAGAAAAAGCGTGAACTAAAGATTTCGGTTGTTTACCCGGGCCAGCAGATATCTGAT
TACTGGATCAGAAATATTGATGCATTTGAAAAGCGCTTAGATAAACTGAATATAGATTATCAGTTAAATCAGGTCTTCAC
CCGACCGAACGCGGATATCAAGCAACAAAGCCTTTCCCTCATGGAAGCTCTTAAAAGTAAATCGGACTATCTTATCTTTA
CTCTTGATACAACGAGACATCGTAAATTTATCGAGCACGTACTGGATTCAAAGAAGACCAAACTCATCTTACAGAACATC
ACTACCCCAGTAAGAGGTTGGGAGCAACATCAGCCGTTTCTCTACGTCGGTTTTGATCATGCAGAGGGCAGCCGGAAGTT
GGCGACAGAGTTTAGTCAGCGTTTTCCAAAACACAGCCGTTACAGTGTTCTTTATTTTTCTGAGGGATACATTAGTGATG
TGCGTGGTAACACCTTTATTCATAAGGTGAATCAGGACAGTAATTTTGAACTGCAATCTGCTTATTACACTAAGGCAACG
AAGCAGTCAGGCTATGAAGCGGCGAAAGCGAGTCTCGAAAAATACCCTGATGTAGAGTTCATTTATGCCTGCTCAACAGA
TGTCGCATTAGGTGCGGTAGAAGCACTAGAGGAACTTGGCCGTGATGATATTATGATTAACGGCTGGGGAGGAGGCTCTG
CTGAGCTTGATGCTATTCTGAATGGAGAAATAGATATTACCGTTATGCGAATGAACGATGATACTGGCATCGCAATGGCA
GAGGCTATCAAGTGGGATTTAGAAGGGAAGTCAGTACCGATCGTATATTCTGGCGATTATGAAGTCGTGACGACATCCGA
TTCTCCGGAAAGAATACAAGCTTTAAAAAAGCGCGCATTTAGATACTCAGATAATTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxP | Vibrio cholerae strain A1552 |
63.736 |
99.726 |
0.636 |