Detailed information NTG1112525

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: KHN94_RS11355
• Genome accession: NZ_HG992758
• Coordinates: 2507026..2510412 (+)
• Length: 1128 a.a.
• NCBI ID: WP_182008807.1
• Uniprot ID: -
• Organism: Vibrio sp. B1FLJ16 isolate B1REV17
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2502026..2515412

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KHN94_RS11335 (ACOMICROBIO_LOCUS1638)	erpA	2502274..2502615 (-)	342	WP_182031819.1	iron-sulfur cluster insertion protein ErpA	-
KHN94_RS11340 (ACOMICROBIO_LOCUS1639)	hemL	2502989..2504284 (+)	1296	WP_182008804.1	glutamate-1-semialdehyde 2,1-aminomutase	-
KHN94_RS11345	-	2504613..2505697 (+)	1085	Protein_2217	AI-2E family transporter	-
KHN94_RS11350 (ACOMICROBIO_LOCUS1640)	rsmC	2505782..2506807 (+)	1026	WP_182031823.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
KHN94_RS11355 (ACOMICROBIO_LOCUS1641)	chiS	2507026..2510412 (+)	3387	WP_182008807.1	response regulator	Regulator
KHN94_RS11360 (ACOMICROBIO_LOCUS1642)	-	2511303..2512985 (+)	1683	WP_182008808.1	ABC transporter substrate-binding protein	-
KHN94_RS11365 (ACOMICROBIO_LOCUS1643)	-	2513155..2514141 (+)	987	WP_182008809.1	ABC transporter permease	-
KHN94_RS11370 (ACOMICROBIO_LOCUS1644)	-	2514144..2515169 (+)	1026	WP_182008810.1	ABC transporter permease	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127589.13 Da
• Isoelectric Point: 5.7831

>NTDB_id=1112525 KHN94_RS11355 WP_182008807.1 2507026..2510412(+) (chiS) [Vibrio sp. B1FLJ16 isolate B1REV17]
MFKFYKKQKFKRLQSTLMTAFLVVSLTPLTITAIFFLHAHSQDLQEQSTSHLLSVRETKQQQIADYFEARETEVMGFVRS
ELAYASGGRFYGLVNAFNRLGNDIEESRENAQQRYIEGSGDQIKTSILPESSNFVGSERYRLLHKRYHWSYTELLKRSDF
RDILLVDINGNVTYSIKKDDNYGTNLLSGRYKDSALGKAFQRLSEDVTERRKVNEDYTPVIVSDFELENGKQVAWLGAPI
VQQGYLHSYAMFSLPSNGITKLIADQNRESSIETLLVGSDHKPRTINTKQDNIQNSLEVIEQALSGNKSVGTYSNGLGEK
IIAAYSPIKARGMNWALVVQLPEKEAFSRIHQLEKLFVIAMLTAFILVVIASHYLSNFITSPLLKLTWAAERVSAGDLDE
TRFNTERKDEIGRLAISFERMQRSIREKIQTIKKQNEELESNIRLIQKQNEELQLADKLKDEFLATTSHELRTPLHGMVG
IAETLISGANGAVPASQKYQLDIIIKSGQRLANLVDDLLDYHKMRYGSMDIQKSAVSLASSTQLVLELSSHLLGNKTIRI
INQVPNDLKAVSADPQRLEQVLYNLIGNAIKYTSEGKIVISASVVDEYVRVQVVDTGQGIPAEHLEHIFEPLIQAGQDET
RYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLASEEEVVASKTLAARGHFQIPEININNTDDLSLPENPD
GPLLYVADDEPVNLRVLESFLRLEGYRVRTASDGPETLELIEQEKPELLLLDIMMPGMSGYQVCSELRQTYDHAELPIIM
LTALSQTEDRVRGFEAGANDYLSKPFNKQELAARIQAHLTASKAEMRHIENKLLESELRQRAQVEASLLETQGRLLEQLE
SAPEAIICLREDQRIRFANEAACKLFKRSLEQIKRSSADELIAPKYLTVKQPHYCGKIDIYIEDIRQNIEADILKLPEGS
GLDVMYIFNVGGGANTARIHNLETAVEVLSSYAFDGDRDQLQKLKELGGEFTRLADKALGNKKDKQDLMREVLVDVMTHA
LEYWESATGESKFAFAEQSGLWRVYLDRSTLQTRTLDKYMRIETLPKTPRWRTVLSSIEYILEHCKEQSPERAYIEAQRD
KLQRLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=1112525 KHN94_RS11355 WP_182008807.1 2507026..2510412(+) (chiS) [Vibrio sp. B1FLJ16 isolate B1REV17]
ATGTTCAAATTCTACAAAAAACAGAAGTTTAAGCGCCTTCAAAGTACGCTGATGACTGCGTTTCTTGTCGTCAGTCTCAC
GCCTTTAACCATTACCGCAATTTTCTTCCTGCACGCTCACAGCCAGGATCTGCAAGAACAGAGCACATCACACCTGCTTT
CTGTGCGAGAGACTAAACAACAACAAATTGCTGATTACTTCGAAGCTCGGGAAACTGAAGTAATGGGCTTTGTACGCTCT
GAATTAGCCTACGCCAGTGGCGGACGTTTTTACGGTCTGGTCAATGCATTTAACCGCTTAGGCAACGATATTGAGGAGTC
TCGTGAAAATGCACAGCAACGCTATATTGAAGGCAGCGGCGACCAAATAAAAACATCAATTTTGCCGGAGTCTTCCAACT
TTGTCGGTAGTGAACGTTACCGGCTATTGCACAAACGCTATCACTGGTCTTATACAGAACTGCTCAAACGCTCGGACTTC
AGAGATATTTTGCTGGTCGATATCAACGGCAATGTGACCTATTCGATCAAGAAAGACGACAATTACGGTACTAACCTCCT
ATCCGGCCGATATAAAGATTCAGCGCTGGGCAAAGCGTTTCAGCGTTTGTCTGAAGATGTAACTGAACGCCGTAAAGTGA
ATGAGGACTACACGCCTGTAATTGTCTCAGATTTTGAGCTGGAAAATGGTAAACAAGTCGCTTGGTTAGGAGCGCCGATC
GTTCAGCAAGGCTACCTGCATAGCTATGCCATGTTCAGCTTGCCGAGTAATGGCATCACTAAACTGATTGCCGATCAGAA
CCGGGAATCCTCCATCGAAACTTTGCTCGTCGGAAGCGATCATAAGCCCAGAACGATTAACACCAAACAAGATAATATCC
AAAACAGCCTGGAGGTTATTGAGCAGGCACTTTCAGGAAACAAGAGCGTAGGGACATATTCAAATGGATTAGGTGAAAAG
ATCATTGCCGCCTACTCGCCAATTAAAGCTCGTGGAATGAACTGGGCTCTGGTGGTTCAGCTACCAGAAAAAGAAGCCTT
TTCTCGTATTCATCAGTTAGAAAAACTGTTCGTCATTGCGATGTTGACGGCATTTATTCTGGTGGTCATTGCCTCTCATT
ACTTATCTAACTTCATCACTTCTCCGTTACTGAAATTAACCTGGGCTGCCGAGCGGGTATCTGCCGGTGATCTTGACGAA
ACAAGATTCAATACCGAACGTAAAGACGAAATTGGACGATTAGCTATTAGCTTTGAGCGTATGCAACGATCAATTCGTGA
AAAAATCCAGACCATCAAGAAGCAAAACGAAGAGCTGGAAAGTAATATCCGCCTGATTCAGAAACAGAATGAGGAGCTGC
AACTTGCCGATAAACTCAAAGATGAGTTTCTGGCAACGACCTCCCATGAGCTAAGAACACCTTTACATGGCATGGTCGGT
ATTGCAGAGACTTTAATCTCCGGTGCGAATGGTGCCGTTCCTGCGAGCCAAAAGTACCAGCTTGATATCATTATTAAAAG
TGGTCAGCGCTTGGCCAATCTTGTTGATGACTTGCTGGATTACCACAAAATGCGCTATGGCAGCATGGACATACAAAAAT
CCGCTGTCAGTCTGGCAAGCTCTACGCAACTGGTGCTTGAGCTATCGAGCCATCTGCTCGGCAATAAAACCATCCGCATA
ATTAACCAGGTGCCTAATGATCTAAAAGCGGTATCCGCAGATCCACAACGGCTTGAGCAGGTTCTTTACAACCTAATCGG
TAACGCAATCAAATACACTTCAGAGGGAAAAATTGTCATTTCTGCCAGTGTGGTTGACGAATATGTCCGGGTTCAGGTCG
TCGATACCGGTCAGGGTATCCCCGCAGAACACCTTGAACACATCTTCGAGCCCTTAATTCAGGCCGGACAAGATGAGACT
CGCTACCGCCAGGGTGCTGGATTAGGCCTGTCTATCAGCCGCCAGTTAATTGAGCTGATGGGTGGTTCACTGTATGTCAG
CAGTCAACCAATGGTAGGTACCACCTTTAGTTTCACGCTTCCGCTTGCCAGTGAAGAAGAGGTCGTGGCCTCGAAGACTC
TAGCTGCCCGTGGCCATTTCCAGATACCTGAAATCAACATAAACAATACAGATGATCTGTCTTTGCCTGAAAACCCGGAC
GGCCCGCTTCTGTATGTAGCCGACGATGAGCCGGTAAACCTTCGCGTACTTGAAAGCTTTTTACGCCTGGAAGGCTACCG
GGTCCGCACGGCTTCAGACGGGCCTGAAACACTGGAACTCATTGAACAGGAGAAACCAGAGCTTCTGCTACTTGATATTA
TGATGCCGGGGATGAGTGGCTATCAGGTGTGTAGCGAATTGCGCCAGACCTATGACCATGCTGAACTGCCAATCATCATG
CTGACCGCGCTGAGCCAGACCGAAGATCGCGTCAGAGGGTTCGAAGCCGGAGCAAATGATTACCTATCCAAGCCGTTTAA
CAAACAAGAACTCGCGGCGCGAATTCAGGCACATTTAACCGCAAGCAAAGCGGAAATGCGCCATATCGAAAACAAGTTAC
TCGAATCTGAACTTCGTCAACGAGCACAAGTAGAAGCAAGCCTGCTCGAAACTCAGGGCCGCCTGCTCGAACAACTGGAG
TCAGCACCTGAAGCCATAATCTGCTTACGCGAAGACCAGCGAATCCGATTTGCCAACGAAGCCGCATGCAAGCTATTCAA
GCGCAGTTTAGAGCAAATAAAACGCTCTTCTGCCGATGAACTGATTGCGCCTAAATATCTGACTGTCAAGCAGCCACATT
ACTGCGGAAAAATTGATATTTACATTGAGGATATTCGTCAGAATATTGAAGCGGATATTCTTAAGTTACCTGAAGGATCC
GGTCTGGACGTTATGTACATCTTTAATGTCGGCGGTGGCGCGAACACCGCTCGTATACATAACCTGGAAACTGCGGTAGA
AGTTCTTTCAAGTTACGCATTCGACGGTGACCGAGATCAGCTGCAGAAACTGAAAGAACTGGGGGGCGAGTTCACTCGTT
TAGCAGACAAAGCACTAGGCAACAAAAAAGACAAACAGGATCTGATGCGCGAGGTGTTGGTAGATGTAATGACGCACGCT
CTTGAATACTGGGAGTCCGCAACCGGAGAAAGTAAGTTTGCCTTTGCTGAACAAAGTGGCCTGTGGCGGGTGTACCTTGA
CCGGAGCACCCTACAAACACGTACTTTAGATAAGTACATGAGAATCGAGACATTGCCTAAAACACCGCGCTGGAGAACGG
TTCTGAGTTCAATCGAATACATTCTCGAACATTGCAAAGAGCAAAGCCCGGAACGCGCTTATATTGAAGCTCAGCGCGAC
AAGTTACAAAGGTTGCTAACCAGCTAA

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• Response regulator receiver domain (Response_reg) (726-836)

• HAMP domain (HAMP) (375-427)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	75.199	100	0.753