Detailed information
Bioinformatically predicted
Overview
| Name | luxP | Type | Regulator |
| Locus tag | KHO06_RS19970 | Genome accession | NZ_HG992752 |
| Coordinates | 692507..693604 (+) | Length | 365 a.a. |
| NCBI ID | WP_038889042.1 | Uniprot ID | A0A812H8E7 |
| Organism | Vibrio sp. B1FIG11 isolate LMG10946-nano | ||
| Function | autoinducer sensor (predicted from homology) Competence regulation |
||
Genomic Context
Location: 687507..698604
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KHO06_RS19940 (ACOMICROBIO_LMKGKHOH_04786) | - | 687748..688737 (+) | 990 | WP_212583225.1 | Gfo/Idh/MocA family oxidoreductase | - |
| KHO06_RS19945 (ACOMICROBIO_LOCUS3813) | - | 688831..690168 (-) | 1338 | WP_212583226.1 | MATE family efflux transporter | - |
| KHO06_RS19950 (ACOMICROBIO_LMKGKHOH_04788) | - | 690293..690607 (-) | 315 | WP_005373603.1 | DUF496 family protein | - |
| KHO06_RS19955 (ACOMICROBIO_LMKGKHOH_04789) | - | 690846..691049 (+) | 204 | WP_005433391.1 | hypothetical protein | - |
| KHO06_RS19960 (ACOMICROBIO_LMKGKHOH_04790) | - | 691143..691796 (+) | 654 | WP_038889043.1 | YceH family protein | - |
| KHO06_RS19965 (ACOMICROBIO_LOCUS3814) | - | 691793..692107 (+) | 315 | WP_005433435.1 | GIY-YIG nuclease family protein | - |
| KHO06_RS19970 (ACOMICROBIO_LOCUS3815) | luxP | 692507..693604 (+) | 1098 | WP_038889042.1 | autoinducer 2-binding periplasmic protein LuxP | Regulator |
| KHO06_RS19975 (ACOMICROBIO_LOCUS3816) | luxQ | 693604..696183 (+) | 2580 | WP_212583227.1 | quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ | - |
| KHO06_RS19980 (ACOMICROBIO_LOCUS3817) | - | 696296..696793 (-) | 498 | WP_212583228.1 | flagellar brake domain-containing protein | - |
| KHO06_RS19985 (ACOMICROBIO_LOCUS3818) | - | 696887..697813 (-) | 927 | WP_212583229.1 | DMT family transporter | - |
| KHO06_RS19990 (ACOMICROBIO_LOCUS3819) | - | 697963..698418 (+) | 456 | WP_005433465.1 | Lrp/AsnC family transcriptional regulator | - |
Sequence
Protein
Download Length: 365 a.a. Molecular weight: 41451.79 Da Isoelectric Point: 5.4779
>NTDB_id=1112502 KHO06_RS19970 WP_038889042.1 692507..693604(+) (luxP) [Vibrio sp. B1FIG11 isolate LMG10946-nano]
MKKALLFSLISMVGFSPASQATQVLNGYWGYQEFLDEFPEQRNLTNALSEAVREQPVPLSKPTKRPLKISVVYPGQQVSD
YWVRNIAAFEKRLDKLNINYQLNQVFTRPNADIKQQSLSLMEALKSKSDYLIFTLDTTRHRKFVEHVLDSTNTKLILQNI
TTPVREWDKHQPFLYVGFDHAEGSRELATEFGKFFPKHTYYSVLYFSEGYISDVRGDTFIHQVNRDNNFELQSAYYTKAT
KQSGYDAAKASLAKHPDVDFIYACSTDVALGAVDALAELGREDIMINGWGGGSAELDAIQKGDLDITVMRMNDDTGIAMA
EAIKWDLEDKPVPTVYSGDFEIVTKADSPERIEALKKRAFRYSDN
MKKALLFSLISMVGFSPASQATQVLNGYWGYQEFLDEFPEQRNLTNALSEAVREQPVPLSKPTKRPLKISVVYPGQQVSD
YWVRNIAAFEKRLDKLNINYQLNQVFTRPNADIKQQSLSLMEALKSKSDYLIFTLDTTRHRKFVEHVLDSTNTKLILQNI
TTPVREWDKHQPFLYVGFDHAEGSRELATEFGKFFPKHTYYSVLYFSEGYISDVRGDTFIHQVNRDNNFELQSAYYTKAT
KQSGYDAAKASLAKHPDVDFIYACSTDVALGAVDALAELGREDIMINGWGGGSAELDAIQKGDLDITVMRMNDDTGIAMA
EAIKWDLEDKPVPTVYSGDFEIVTKADSPERIEALKKRAFRYSDN
Nucleotide
Download Length: 1098 bp
>NTDB_id=1112502 KHO06_RS19970 WP_038889042.1 692507..693604(+) (luxP) [Vibrio sp. B1FIG11 isolate LMG10946-nano]
ATGAAGAAAGCGTTACTATTTTCCCTGATTTCTATGGTCGGTTTTTCTCCAGCGTCTCAAGCAACACAAGTTTTGAATGG
GTACTGGGGTTATCAAGAGTTTTTGGACGAATTTCCCGAGCAACGAAATCTCACCAATGCTTTATCAGAAGCAGTACGAG
AACAGCCGGTCCCACTGTCTAAACCGACAAAACGTCCGCTTAAAATATCAGTGGTTTACCCAGGGCAGCAAGTTTCAGAT
TACTGGGTAAGAAATATTGCAGCATTCGAAAAACGTTTGGATAAGTTGAATATTAACTACCAACTGAACCAAGTGTTTAC
TCGTCCAAATGCTGATATCAAGCAACAAAGCTTGTCACTAATGGAAGCGCTCAAGAGTAAATCGGATTACTTGATTTTCA
CGCTTGATACGACAAGACACCGTAAATTTGTTGAGCACGTTTTGGACTCAACGAACACCAAATTGATCTTGCAAAATATC
ACTACACCAGTCCGTGAGTGGGACAAACATCAACCGTTTTTATATGTCGGATTTGACCACGCAGAAGGCAGTCGTGAATT
AGCAACAGAATTCGGAAAGTTCTTCCCAAAACACACATATTACAGTGTGCTCTACTTTTCTGAAGGTTATATTAGCGATG
TGAGAGGTGATACTTTTATTCACCAAGTAAACCGTGATAATAACTTTGAGCTACAATCAGCGTATTACACGAAGGCAACC
AAGCAATCCGGCTATGATGCTGCGAAAGCGAGTTTAGCAAAACACCCAGATGTTGATTTTATCTATGCATGTTCGACCGA
CGTAGCATTGGGTGCAGTAGACGCACTGGCTGAGTTGGGACGTGAAGATATTATGATCAATGGCTGGGGTGGAGGCTCTG
CTGAGTTAGACGCTATCCAGAAGGGTGATTTAGACATCACCGTCATGCGTATGAATGATGACACTGGCATAGCCATGGCA
GAAGCGATTAAGTGGGACTTGGAAGATAAACCAGTTCCGACCGTATACTCAGGTGACTTTGAAATCGTAACAAAGGCAGA
TTCACCGGAGAGAATCGAAGCGCTGAAAAAGCGCGCATTTAGATATTCAGATAATTGA
ATGAAGAAAGCGTTACTATTTTCCCTGATTTCTATGGTCGGTTTTTCTCCAGCGTCTCAAGCAACACAAGTTTTGAATGG
GTACTGGGGTTATCAAGAGTTTTTGGACGAATTTCCCGAGCAACGAAATCTCACCAATGCTTTATCAGAAGCAGTACGAG
AACAGCCGGTCCCACTGTCTAAACCGACAAAACGTCCGCTTAAAATATCAGTGGTTTACCCAGGGCAGCAAGTTTCAGAT
TACTGGGTAAGAAATATTGCAGCATTCGAAAAACGTTTGGATAAGTTGAATATTAACTACCAACTGAACCAAGTGTTTAC
TCGTCCAAATGCTGATATCAAGCAACAAAGCTTGTCACTAATGGAAGCGCTCAAGAGTAAATCGGATTACTTGATTTTCA
CGCTTGATACGACAAGACACCGTAAATTTGTTGAGCACGTTTTGGACTCAACGAACACCAAATTGATCTTGCAAAATATC
ACTACACCAGTCCGTGAGTGGGACAAACATCAACCGTTTTTATATGTCGGATTTGACCACGCAGAAGGCAGTCGTGAATT
AGCAACAGAATTCGGAAAGTTCTTCCCAAAACACACATATTACAGTGTGCTCTACTTTTCTGAAGGTTATATTAGCGATG
TGAGAGGTGATACTTTTATTCACCAAGTAAACCGTGATAATAACTTTGAGCTACAATCAGCGTATTACACGAAGGCAACC
AAGCAATCCGGCTATGATGCTGCGAAAGCGAGTTTAGCAAAACACCCAGATGTTGATTTTATCTATGCATGTTCGACCGA
CGTAGCATTGGGTGCAGTAGACGCACTGGCTGAGTTGGGACGTGAAGATATTATGATCAATGGCTGGGGTGGAGGCTCTG
CTGAGTTAGACGCTATCCAGAAGGGTGATTTAGACATCACCGTCATGCGTATGAATGATGACACTGGCATAGCCATGGCA
GAAGCGATTAAGTGGGACTTGGAAGATAAACCAGTTCCGACCGTATACTCAGGTGACTTTGAAATCGTAACAAAGGCAGA
TTCACCGGAGAGAATCGAAGCGCTGAAAAAGCGCGCATTTAGATATTCAGATAATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxP | Vibrio cholerae strain A1552 |
63.462 |
99.726 |
0.633 |